RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 MEI1Q5TIA1 1274 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 KRT25Q7Z3Z0 450 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 CCDC13Q8IYE1 715 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 UBLCP1Q8WVY7 318 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-214ENST00000535493 CEP89Q96ST8 783 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 C6orf50Q9HD87 102 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 ITGB4P16144 1822 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 KCNQ2O43526 872 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 MAP2K2P36507 400 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 SBK1Q52WX2 424 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 GUF1Q8N442 669 aaKnown RBP14.73□□□□□ -0.05
HDAC4-214ENST00000535493 CELF4Q9BZC1 486 aaKnown RBP14.73□□□□□ -0.05
HDAC4-214ENST00000535493 AMACRQ9UHK6 382 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 COL4A3BPQ9Y5P4 624 aa14.73□□□□□ -0.05
HDAC4-214ENST00000535493 TMCO5BA8MYB1 307 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 E9PMD0 336 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 RASA1P20936 1047 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 CTNNA1P35221 906 aaKnown RBP14.72□□□□□ -0.05
HDAC4-214ENST00000535493 COPB2P35606 906 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 RPS8P62241 208 aaKnown RBP14.72□□□□□ -0.05
HDAC4-214ENST00000535493 USP38Q8NB14 1042 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 DAGLBQ8NCG7 672 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 CNOT8Q9UFF9 292 aaKnown RBP14.72□□□□□ -0.05
HDAC4-214ENST00000535493 SEC63Q9UGP8 760 aaKnown RBP14.72□□□□□ -0.05
HDAC4-214ENST00000535493 ATP6V0A2Q9Y487 856 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 STRCP1A6NGW2 1772 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 ANKRD36CQ5JPF3 1778 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 SERPING1P05155 500 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 SLC9A1P19634 815 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 ECHS1P30084 290 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 GNAQP50148 359 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 PTK2Q05397 1052 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 SWT1Q5T5J6 900 aaKnown RBP14.72□□□□□ -0.05
HDAC4-214ENST00000535493 CCDC91Q7Z6B0 441 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 MYOCDQ8IZQ8 938 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 MDM1Q8TC05 714 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 CYFIP2Q96F07 1278 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 DPH5Q9H2P9 285 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 BCAS3Q9H6U6 928 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 PHF20L1A8MW92 1017 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 DAPK3O43293 454 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 ECM2O94769 699 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-214ENST00000535493 COASYQ13057 564 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 SLC18A3Q16572 532 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 GLE1Q53GS7 698 aaKnown RBP14.72□□□□□ -0.05
HDAC4-214ENST00000535493 RNF10Q8N5U6 811 aaKnown RBP14.72□□□□□ -0.05
HDAC4-214ENST00000535493 RAD54LQ92698 747 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 CEP95Q96GE4 821 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 EYA3Q99504 573 aa14.72□□□□□ -0.05
HDAC4-214ENST00000535493 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.72□□□□□ -0.05
HDAC4-214ENST00000535493 A0A1B0GUL6 1792 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 SSU72P8A0A1W2PR75 194 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 GOLGA6L10A6NI86 522 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 MARCH6O60337 910 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 PDHBP11177 359 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 GNA11P29992 359 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 TBC1D9BQ66K14 1250 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 CEP57Q86XR8 500 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 LRRC47Q8N1G4 583 aaKnown RBP14.71□□□□□ -0.05
HDAC4-214ENST00000535493 ANKS1AQ92625 1134 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 MTMR9Q96QG7 549 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 TSG101Q99816 390 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 CXorf56Q9H5V9 222 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 MAGEF1Q9HAY2 307 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 FBXL5Q9UKA1 691 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 NOVA2Q9UNW9 492 aaKnown RBP14.71□□□□□ -0.05
HDAC4-214ENST00000535493 NHSL1Q5SYE7 1610 aa14.71□□□□□ -0.05
HDAC4-214ENST00000535493 GCOM1H8Y6P7 765 aaPredicted RBP14.71□□□□□ -0.06
HDAC4-214ENST00000535493 DNM1LO00429 736 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 SART1O43290 800 aaKnown RBP14.71□□□□□ -0.06
HDAC4-214ENST00000535493 MYZAPP0CAP1 466 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 SLURP2P0DP57 97 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 TNFRSF8P28908 595 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 EPS15P42566 896 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 FKBP3Q00688 224 aaKnown RBP14.71□□□□□ -0.06
HDAC4-214ENST00000535493 RPS6KA1Q15418 735 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 KRT79Q5XKE5 535 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 TAF4BQ92750 862 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 TAF1DQ9H5J8 278 aaPredicted RBP14.71□□□□□ -0.06
HDAC4-214ENST00000535493 GPCPD1Q9NPB8 672 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 PANK4Q9NVE7 773 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 CEP72Q9P209 647 aa14.71□□□□□ -0.06
HDAC4-214ENST00000535493 DDX20Q9UHI6 824 aaKnown RBP14.71□□□□□ -0.06
HDAC4-214ENST00000535493 FSBPO95073 299 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 FAM107AO95990 144 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 LRRC63Q05C16 580 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 ZNF844Q08AG5 666 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 GJB7Q6PEY0 223 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 ZNF571Q7Z3V5 609 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-214ENST00000535493 CCDC114Q96M63 670 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 OSBPL7Q9BZF2 842 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 DNAJC5Q9H3Z4 198 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 TMBIM4Q9HC24 238 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 KLC4Q9NSK0 619 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 NR2E1Q9Y466 385 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 SMIM23A6NLE4 172 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 OPLAHO14841 1288 aa14.7□□□□□ -0.06
HDAC4-214ENST00000535493 LDHBP07195 334 aaKnown RBP14.7□□□□□ -0.06
HDAC4-214ENST00000535493 HERC4Q5GLZ8 1057 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-214ENST00000535493 DNAJC19Q96DA6 116 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms