RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 HERC6Q8IVU3 1022 aa18.6■□□□□ 0.57
CLSTN3-204ENST00000535313 GIMAP8Q8ND71 665 aaPredicted RBP18.6■□□□□ 0.57
CLSTN3-204ENST00000535313 PPM1EQ8WY54 764 aa18.6■□□□□ 0.57
CLSTN3-204ENST00000535313 CDHR1Q96JP9 859 aa18.6■□□□□ 0.57
CLSTN3-204ENST00000535313 SENP7Q9BQF6 1050 aa18.6■□□□□ 0.57
CLSTN3-204ENST00000535313 TET1Q8NFU7 2136 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 NBNO60934 754 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 CXCL10P02778 98 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 CA3P07451 260 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 EXOSC10Q01780 885 aaKnown RBP18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 ADGRE1Q14246 886 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 GPNMBQ14956 572 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 TRIM71Q2Q1W2 868 aaKnown RBP18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 ZNF618Q5T7W0 954 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 APOA5Q6Q788 366 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 SERINC5Q86VE9 423 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 USP38Q8NB14 1042 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 ATP6V0A1Q93050 837 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 GPR20Q99678 358 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 ZNF215Q9UL58 517 aaPredicted RBP18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 CHD7Q9P2D1 2997 aa18.59■□□□□ 0.57
CLSTN3-204ENST00000535313 ZBTB43O43298 467 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 HMGB1P09429 215 aaKnown RBP18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 SMIM10L2AP0DMW4 78 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 SMIM10L2BP0DMW5 78 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 GNAT1P11488 350 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 THPOP40225 353 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 SP4Q02446 784 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 HIC1Q14526 733 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 UBE2SQ16763 222 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 RTN1Q16799 776 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 RASEFQ8IZ41 740 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 WNT8BQ93098 351 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 GPRASP2Q96D09 838 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 TCEANC2Q96MN5 208 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 EHMT1Q9H9B1 1298 aa18.58■□□□□ 0.56
CLSTN3-204ENST00000535313 EMSYQ7Z589 1322 aa18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 ABHD14A-ACY1A0A1B0GW23 586 aa18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 EFCAB14O75071 495 aa18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 WDR5P61964 334 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 FGD1P98174 961 aa18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 ADCK5Q3MIX3 580 aa18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 UTP14CQ5TAP6 766 aaKnown RBP18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 PCDHA6Q9UN73 950 aa18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 PCDHA8Q9Y5H6 950 aa18.57■□□□□ 0.56
CLSTN3-204ENST00000535313 VCANP13611 3396 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 CNTNAP5Q8WYK1 1306 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 RSPH10B2B2RC85 870 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 TLL1O43897 1013 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 RSPH10BP0C881 870 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 HOXC8P31273 242 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 MTMR1Q13613 665 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 IKBKEQ14164 716 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 CCDC85BQ15834 202 aaPredicted RBP18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 TRAF7Q6Q0C0 670 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 TRIM50Q86XT4 487 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 ZBED2Q9BTP6 218 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 RNPEPQ9H4A4 650 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 BRPF3Q9ULD4 1205 aa18.56■□□□□ 0.56
CLSTN3-204ENST00000535313 KLF18A0A0U1RQI7 1052 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 GOLGA8AA7E2F4 631 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 GOLGA8BA8MQT2 603 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 TREHO43280 583 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 LGR5O75473 907 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 ITGB5P18084 799 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 NAPAP54920 295 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 WWC2Q6AWC2 1192 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 TEX2Q8IWB9 1127 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 SYMPKQ92797 1274 aaKnown RBP18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 CERS4Q9HA82 394 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 SETD4Q9NVD3 440 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 NAP1L2Q9ULW6 460 aaPredicted RBP18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 UBIAD1Q9Y5Z9 338 aa18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 V9GY48 417 aaPredicted RBP18.55■□□□□ 0.56
CLSTN3-204ENST00000535313 MAFGO15525 162 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 ATP9AO75110 1047 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 CAND2O75155 1236 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 KCNA2P16389 499 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 DEFB103AP81534 67 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 MBTPS1Q14703 1052 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 PPP1R18Q6NYC8 613 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 SEPT1Q8WYJ6 367 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 JADE2Q9NQC1 790 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 TELO2Q9Y4R8 837 aa18.54■□□□□ 0.56
CLSTN3-204ENST00000535313 hCG_1984214I3L0E3 225 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 GTPBP6O43824 516 aaPredicted RBP18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 FOSP01100 380 aaPredicted RBP18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 TCF7P36402 384 aaPredicted RBP18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 ADCY7P51828 1080 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 RCAN1P53805 252 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 ARHGAP4P98171 946 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 TAP1Q03518 808 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 TJAP1Q5JTD0 557 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 MICALL1Q8N3F8 863 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 ZNF713Q8N859 430 aaPredicted RBP18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 ARNTL2Q8WYA1 636 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 TTC28Q96AY4 2481 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 GLT8D2Q9H1C3 349 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 TSPYL2Q9H2G4 693 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms