RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 PPP4R3AQ6IN85 833 aa23.34■■□□□ 1.33
CHFR-209ENST00000535181 GLT1D1Q96MS3 346 aa23.34■■□□□ 1.33
CHFR-209ENST00000535181 SPATA33Q96N06 139 aa23.34■■□□□ 1.33
CHFR-209ENST00000535181 HTATIP2Q9BUP3 242 aa23.34■■□□□ 1.33
CHFR-209ENST00000535181 SENP6Q9GZR1 1112 aaPredicted RBP23.34■■□□□ 1.33
CHFR-209ENST00000535181 PURAQ00577 322 aaKnown RBP23.33■■□□□ 1.33
CHFR-209ENST00000535181 SNX17Q15036 470 aa23.33■■□□□ 1.33
CHFR-209ENST00000535181 DGKDQ16760 1214 aa23.33■■□□□ 1.33
CHFR-209ENST00000535181 HSDL1Q3SXM5 330 aa23.33■■□□□ 1.33
CHFR-209ENST00000535181 PRR16Q569H4 304 aa23.33■■□□□ 1.33
CHFR-209ENST00000535181 CYFIP1Q7L576 1253 aa23.33■■□□□ 1.33
CHFR-209ENST00000535181 DOCK5Q9H7D0 1870 aa23.32■■□□□ 1.32
CHFR-209ENST00000535181 PPFIA4O75335 1185 aa23.32■■□□□ 1.32
CHFR-209ENST00000535181 PDCP20941 246 aa23.32■■□□□ 1.32
CHFR-209ENST00000535181 U2AF2P26368 475 aaKnown RBP eCLIP23.32■■□□□ 1.32
CHFR-209ENST00000535181 SDF4Q9BRK5 362 aa23.32■■□□□ 1.32
CHFR-209ENST00000535181 SEZ6LQ9BYH1 1024 aa23.32■■□□□ 1.32
CHFR-209ENST00000535181 BCAS3Q9H6U6 928 aa23.32■■□□□ 1.32
CHFR-209ENST00000535181 STARD7Q9NQZ5 370 aa23.32■■□□□ 1.32
CHFR-209ENST00000535181 SCN10AQ9Y5Y9 1956 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 FAM205CA6NFA0 338 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 IPO5O00410 1097 aaKnown RBP23.31■■□□□ 1.32
CHFR-209ENST00000535181 TDP2O95551 362 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 ITGB3BPQ13352 177 aaPredicted RBP23.31■■□□□ 1.32
CHFR-209ENST00000535181 LETM2Q2VYF4 491 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 LARP1BQ659C4 914 aaKnown RBP23.31■■□□□ 1.32
CHFR-209ENST00000535181 CXCL17Q6UXB2 119 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 NOSTRINQ8IVI9 506 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 FERMT2Q96AC1 680 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 GPR20Q99678 358 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 ZNF577Q9BSK1 485 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 MTG1Q9BT17 334 aaPredicted RBP23.31■■□□□ 1.32
CHFR-209ENST00000535181 JPH1Q9HDC5 661 aaPredicted RBP23.31■■□□□ 1.32
CHFR-209ENST00000535181 TBC1D22BQ9NU19 505 aa23.31■■□□□ 1.32
CHFR-209ENST00000535181 H3BQV1 296 aa23.3■■□□□ 1.32
CHFR-209ENST00000535181 NOP56O00567 594 aaKnown RBP23.3■■□□□ 1.32
CHFR-209ENST00000535181 SLC39A5Q6ZMH5 540 aa23.3■■□□□ 1.32
CHFR-209ENST00000535181 DDX25Q9UHL0 483 aaKnown RBP23.3■■□□□ 1.32
CHFR-209ENST00000535181 A0A0U1RQG5 324 aaPredicted RBP23.29■■□□□ 1.32
CHFR-209ENST00000535181 MSH4O15457 936 aa23.29■■□□□ 1.32
CHFR-209ENST00000535181 DHX15O43143 795 aaKnown RBP23.29■■□□□ 1.32
CHFR-209ENST00000535181 MYL3P08590 195 aa23.29■■□□□ 1.32
CHFR-209ENST00000535181 TRAPPC10P48553 1259 aa23.29■■□□□ 1.32
CHFR-209ENST00000535181 MLLT1Q03111 559 aaPredicted RBP23.29■■□□□ 1.32
CHFR-209ENST00000535181 GNL2Q13823 731 aaKnown RBP23.29■■□□□ 1.32
CHFR-209ENST00000535181 SLC5A5Q92911 643 aa23.29■■□□□ 1.32
CHFR-209ENST00000535181 RIT2Q99578 217 aa23.29■■□□□ 1.32
CHFR-209ENST00000535181 PKD2L1Q9P0L9 805 aa23.29■■□□□ 1.32
CHFR-209ENST00000535181 SLC9A2Q9UBY0 812 aa23.29■■□□□ 1.32
CHFR-209ENST00000535181 ALPK3Q96L96 1907 aa23.29■■□□□ 1.32
CHFR-209ENST00000535181 KIF28PB7ZC32 967 aa23.28■■□□□ 1.32
CHFR-209ENST00000535181 CCNT1O60563 726 aaKnown RBP23.28■■□□□ 1.32
CHFR-209ENST00000535181 F2P00734 622 aa23.28■■□□□ 1.32
CHFR-209ENST00000535181 ORC2Q13416 577 aaPredicted RBP23.28■■□□□ 1.32
CHFR-209ENST00000535181 SLC43A3Q8NBI5 491 aa23.28■■□□□ 1.32
CHFR-209ENST00000535181 ETNPPLQ8TBG4 499 aa23.28■■□□□ 1.32
CHFR-209ENST00000535181 DNAH12Q6ZR08 3092 aa23.27■■□□□ 1.32
CHFR-209ENST00000535181 TBX3O15119 743 aa23.27■■□□□ 1.32
CHFR-209ENST00000535181 SLC37A4O43826 429 aa23.27■■□□□ 1.32
CHFR-209ENST00000535181 SORBS3O60504 671 aa23.27■■□□□ 1.32
CHFR-209ENST00000535181 LRRC26Q2I0M4 334 aa23.27■■□□□ 1.32
CHFR-209ENST00000535181 SEPT1Q8WYJ6 367 aa23.27■■□□□ 1.32
CHFR-209ENST00000535181 KATNAL1Q9BW62 490 aa23.27■■□□□ 1.32
CHFR-209ENST00000535181 KCNMB3Q9NPA1 279 aa23.27■■□□□ 1.32
CHFR-209ENST00000535181 ARVCFO00192 962 aa23.26■■□□□ 1.31
CHFR-209ENST00000535181 CDK7P50613 346 aa23.26■■□□□ 1.31
CHFR-209ENST00000535181 ATN1P54259 1190 aaPredicted RBP23.26■■□□□ 1.31
CHFR-209ENST00000535181 KRT76Q01546 638 aa23.26■■□□□ 1.31
CHFR-209ENST00000535181 ZNF746Q6NUN9 644 aaPredicted RBP23.26■■□□□ 1.31
CHFR-209ENST00000535181 KAT2BQ92831 832 aa23.26■■□□□ 1.31
CHFR-209ENST00000535181 FAM20AQ96MK3 541 aa23.26■■□□□ 1.31
CHFR-209ENST00000535181 C16orf70Q9BSU1 422 aa23.26■■□□□ 1.31
CHFR-209ENST00000535181 MROH7Q68CQ1 1323 aa23.26■■□□□ 1.31
CHFR-209ENST00000535181 GSTTP1A0A1W2PQM5 241 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 HAS3O00219 553 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 ATG7O95352 703 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 LGALS2P05162 132 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 ACTR2P61160 394 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 ITGA7Q13683 1181 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 ANKRD33Q7Z3H0 272 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 VTI1AQ96AJ9 217 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 TOX2Q96NM4 488 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 NOL7Q9UMY1 257 aaKnown RBP23.25■■□□□ 1.31
CHFR-209ENST00000535181 GRIN2DO15399 1336 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 EMSYQ7Z589 1322 aa23.25■■□□□ 1.31
CHFR-209ENST00000535181 PSMD10O75832 226 aa23.24■■□□□ 1.31
CHFR-209ENST00000535181 CCNE2O96020 404 aa23.24■■□□□ 1.31
CHFR-209ENST00000535181 HSP90AA1P07900 732 aaKnown RBP23.24■■□□□ 1.31
CHFR-209ENST00000535181 ZNF286BP0CG31 522 aa23.24■■□□□ 1.31
CHFR-209ENST00000535181 PDIA4P13667 645 aaKnown RBP23.24■■□□□ 1.31
CHFR-209ENST00000535181 SYT1P21579 422 aa23.24■■□□□ 1.31
CHFR-209ENST00000535181 TCF7P36402 384 aaPredicted RBP23.24■■□□□ 1.31
CHFR-209ENST00000535181 RTP1P59025 263 aa23.24■■□□□ 1.31
CHFR-209ENST00000535181 SP4Q02446 784 aa23.24■■□□□ 1.31
CHFR-209ENST00000535181 PTPN11Q06124 597 aaPredicted RBP23.24■■□□□ 1.31
CHFR-209ENST00000535181 NFRKBQ6P4R8 1299 aa23.24■■□□□ 1.31
CHFR-209ENST00000535181 SMAP1Q8IYB5 467 aaPredicted RBP23.24■■□□□ 1.31
CHFR-209ENST00000535181 TEKT3Q9BXF9 490 aa23.24■■□□□ 1.31
CHFR-209ENST00000535181 TCEAL9Q9UHQ7 104 aa23.24■■□□□ 1.31
CHFR-209ENST00000535181 TELO2Q9Y4R8 837 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms