RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 SMOC2Q9H3U7 446 aa12.69□□□□□ -0.38
VAMP1-204ENST00000535180 PI15O43692 258 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 CAND2O75155 1236 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
VAMP1-204ENST00000535180 SDHBP21912 280 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 KIAA0319Q5VV43 1072 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 DTWD2Q8NBA8 298 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 FLCNQ8NFG4 579 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 VN1R2Q8NFZ6 395 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 EMID1Q96A84 441 aaPredicted RBP12.68□□□□□ -0.38
VAMP1-204ENST00000535180 CHMP4CQ96CF2 233 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 RANBP17Q9H2T7 1088 aaKnown RBP12.68□□□□□ -0.38
VAMP1-204ENST00000535180 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 LOXHD1Q8IVV2 1947 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 PLIN4Q96Q06 1357 aa12.68□□□□□ -0.38
VAMP1-204ENST00000535180 MINDY4BA8MYZ0 360 aa12.67□□□□□ -0.38
VAMP1-204ENST00000535180 PER2O15055 1255 aa12.67□□□□□ -0.38
VAMP1-204ENST00000535180 ZNF286BP0CG31 522 aa12.67□□□□□ -0.38
VAMP1-204ENST00000535180 ATXN1P54253 815 aaKnown RBP12.67□□□□□ -0.38
VAMP1-204ENST00000535180 RPS6P62753 249 aaKnown RBP12.67□□□□□ -0.38
VAMP1-204ENST00000535180 UBE3CQ15386 1083 aa12.67□□□□□ -0.38
VAMP1-204ENST00000535180 TMEM184AQ6ZMB5 413 aa12.67□□□□□ -0.38
VAMP1-204ENST00000535180 DCLK2Q8N568 766 aa12.67□□□□□ -0.38
VAMP1-204ENST00000535180 NEDD1Q8NHV4 660 aa12.67□□□□□ -0.38
VAMP1-204ENST00000535180 CLEC4DQ8WXI8 215 aa12.67□□□□□ -0.38
VAMP1-204ENST00000535180 CDCA3Q99618 268 aaPredicted RBP12.67□□□□□ -0.38
VAMP1-204ENST00000535180 RTP3Q9BQQ7 232 aa12.67□□□□□ -0.38
VAMP1-204ENST00000535180 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.67□□□□□ -0.38
VAMP1-204ENST00000535180 CACNA1IQ9P0X4 2223 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 PRDM1O75626 825 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 DGKIO75912 1065 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 CTSHP09668 335 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 SRGAP2BP0DMP2 458 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 ARP10275 920 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 NPR3P17342 541 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 DUSP6Q16828 381 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 ANKRD54Q6NXT1 300 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 SEPT14Q6ZU15 432 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 PPTC7Q8NI37 304 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 ATP6V0A1Q93050 837 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 CHAMP1Q96JM3 812 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 TSHZ2Q9NRE2 1034 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 MRPL42Q9Y6G3 142 aaKnown RBP12.66□□□□□ -0.38
VAMP1-204ENST00000535180 R4GN57 208 aa12.66□□□□□ -0.38
VAMP1-204ENST00000535180 FNDC1Q4ZHG4 1894 aaPredicted RBP12.65□□□□□ -0.38
VAMP1-204ENST00000535180 MYH6P13533 1939 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 C2CD4DB7Z1M9 353 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 PPFIA4O75335 1185 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 CHGBP05060 677 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 ADRB1P08588 477 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 HOXD8P13378 290 aaPredicted RBP12.65□□□□□ -0.38
VAMP1-204ENST00000535180 HOXC8P31273 242 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 LAMC2Q13753 1193 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 KCNC3Q14003 757 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 SYCE2Q6PIF2 218 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 PUS7LQ9H0K6 701 aaKnown RBP12.65□□□□□ -0.38
VAMP1-204ENST00000535180 PAG1Q9NWQ8 432 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 DDX41Q9UJV9 622 aaKnown RBP12.65□□□□□ -0.38
VAMP1-204ENST00000535180 GPR179Q6PRD1 2367 aa12.65□□□□□ -0.38
VAMP1-204ENST00000535180 C17orf102A2RUQ5 167 aa12.64□□□□□ -0.39
VAMP1-204ENST00000535180 GSG1L2A8MUP6 293 aa12.64□□□□□ -0.39
VAMP1-204ENST00000535180 ENPP3O14638 875 aa12.64□□□□□ -0.39
VAMP1-204ENST00000535180 TSPY3P0CV98 308 aa12.64□□□□□ -0.39
VAMP1-204ENST00000535180 TSPY8P0CW00 308 aa12.64□□□□□ -0.39
VAMP1-204ENST00000535180 TECP42680 631 aa12.64□□□□□ -0.39
VAMP1-204ENST00000535180 ZC3H14Q6PJT7 736 aaKnown RBP12.64□□□□□ -0.39
VAMP1-204ENST00000535180 ERC1Q8IUD2 1116 aa12.64□□□□□ -0.39
VAMP1-204ENST00000535180 CMTR2Q8IYT2 770 aaKnown RBP12.64□□□□□ -0.39
VAMP1-204ENST00000535180 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
VAMP1-204ENST00000535180 MICAL1Q8TDZ2 1067 aa12.64□□□□□ -0.39
VAMP1-204ENST00000535180 SETXQ7Z333 2677 aaKnown RBP12.63□□□□□ -0.39
VAMP1-204ENST00000535180 TREHO43280 583 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 ASGR2P07307 311 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 TRIM27P14373 513 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 HOXB8P17481 243 aaPredicted RBP12.63□□□□□ -0.39
VAMP1-204ENST00000535180 UBE3AQ05086 875 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 FAM26DQ5JW98 314 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 BTNL9Q6UXG8 535 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 RASGRP2Q7LDG7 609 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
VAMP1-204ENST00000535180 RASGRP4Q8TDF6 673 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 NECTIN4Q96NY8 510 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 STRBPQ96SI9 672 aaKnown RBP12.63□□□□□ -0.39
VAMP1-204ENST00000535180 APOL5Q9BWW9 433 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 PNMA2Q9UL42 364 aa12.63□□□□□ -0.39
VAMP1-204ENST00000535180 DENND4AQ7Z401 1863 aa12.62□□□□□ -0.39
VAMP1-204ENST00000535180 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
VAMP1-204ENST00000535180 TFAP4Q01664 338 aa12.62□□□□□ -0.39
VAMP1-204ENST00000535180 STXBP2Q15833 593 aa12.62□□□□□ -0.39
VAMP1-204ENST00000535180 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
VAMP1-204ENST00000535180 ZDHHC14Q8IZN3 488 aa12.62□□□□□ -0.39
VAMP1-204ENST00000535180 C16orf70Q9BSU1 422 aa12.62□□□□□ -0.39
VAMP1-204ENST00000535180 RNPEPQ9H4A4 650 aa12.62□□□□□ -0.39
VAMP1-204ENST00000535180 POMKQ9H5K3 350 aa12.62□□□□□ -0.39
VAMP1-204ENST00000535180 SH2B1Q9NRF2 756 aaPredicted RBP12.62□□□□□ -0.39
VAMP1-204ENST00000535180 LIMD1Q9UGP4 676 aa12.62□□□□□ -0.39
VAMP1-204ENST00000535180 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
VAMP1-204ENST00000535180 PPFIA3O75145 1194 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms