RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 USP38Q8NB14 1042 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 GIMAP8Q8ND71 665 aaPredicted RBP21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 GPR20Q99678 358 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 RBM28Q9NW13 759 aaKnown RBP21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 SCN5AQ14524 2016 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 NOP56O00567 594 aaKnown RBP21.65■■□□□ 1.06
NDUFS3-213ENST00000534716 KRT32Q14532 448 aa21.65■■□□□ 1.06
NDUFS3-213ENST00000534716 MICU3Q86XE3 530 aa21.65■■□□□ 1.06
NDUFS3-213ENST00000534716 RASEFQ8IZ41 740 aa21.65■■□□□ 1.06
NDUFS3-213ENST00000534716 WNT8BQ93098 351 aa21.65■■□□□ 1.06
NDUFS3-213ENST00000534716 GPRASP2Q96D09 838 aa21.65■■□□□ 1.06
NDUFS3-213ENST00000534716 CDHR1Q96JP9 859 aa21.65■■□□□ 1.06
NDUFS3-213ENST00000534716 C17orf102A2RUQ5 167 aa21.64■■□□□ 1.05
NDUFS3-213ENST00000534716 CA3P07451 260 aa21.64■■□□□ 1.05
NDUFS3-213ENST00000534716 FUT2Q10981 343 aa21.64■■□□□ 1.05
NDUFS3-213ENST00000534716 ZNF618Q5T7W0 954 aa21.64■■□□□ 1.05
NDUFS3-213ENST00000534716 RAB11FIP4Q86YS3 637 aa21.64■■□□□ 1.05
NDUFS3-213ENST00000534716 EMSYQ7Z589 1322 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 ABHD14A-ACY1A0A1B0GW23 586 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 KIF28PB7ZC32 967 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 EFCAB14O75071 495 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 CAND2O75155 1236 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 HMGB1P09429 215 aaKnown RBP21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 SMIM10L2AP0DMW4 78 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 SMIM10L2BP0DMW5 78 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 KCNJ6P48051 423 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 RCAN1P53805 252 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 WDR5P61964 334 aaKnown RBP21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 MBTPS1Q14703 1052 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 ADCK5Q3MIX3 580 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 CCDC82Q8N4S0 544 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 KCNB2Q92953 911 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 RNPEPQ9H4A4 650 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 BRPF3Q9ULD4 1205 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 MYH7BA7E2Y1 1941 aa21.63■■□□□ 1.05
NDUFS3-213ENST00000534716 GBF1Q92538 1859 aa21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 CNTNAP5Q8WYK1 1306 aa21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 hCG_1642624A0A1W2PR95 340 aa21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 MAFGO15525 162 aa21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 GNAT1P11488 350 aa21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 KCNA2P16389 499 aa21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 ITGB5P18084 799 aa21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 POU3F3P20264 500 aaPredicted RBP21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 ATP6V0A1Q93050 837 aa21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 UBIAD1Q9Y5Z9 338 aa21.62■■□□□ 1.05
NDUFS3-213ENST00000534716 SPDYE3A6NKU9 549 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 ZBTB43O43298 467 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 ADAM17P78536 824 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 UBE2SQ16763 222 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 TCTN1Q2MV58 587 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 PPP1R18Q6NYC8 613 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 HEATR3Q7Z4Q2 680 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 ZNF215Q9UL58 517 aaPredicted RBP21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 PCDHA6Q9UN73 950 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 PCDHA8Q9Y5H6 950 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 XIRP2A4UGR9 3374 aa21.61■■□□□ 1.05
NDUFS3-213ENST00000534716 RSPH10B2B2RC85 870 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 hCG_1984214I3L0E3 225 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 ATP9AO75110 1047 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 LGR5O75473 907 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 RSPH10BP0C881 870 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 TAP1Q03518 808 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 IKBKEQ14164 716 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 RTN1Q16799 776 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 WWC2Q6AWC2 1192 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 ZNF713Q8N859 430 aaPredicted RBP21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 RIC8AQ9NPQ8 531 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 TELO2Q9Y4R8 837 aa21.6■■□□□ 1.05
NDUFS3-213ENST00000534716 TET1Q8NFU7 2136 aa21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 TREHO43280 583 aa21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 IGFBP4P22692 258 aa21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 THPOP40225 353 aa21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 MKRN4PQ13434 485 aaPredicted RBP21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 MTMR1Q13613 665 aa21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 SYMPKQ92797 1274 aaKnown RBP21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 TCEANC2Q96MN5 208 aa21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 EHMT1Q9H9B1 1298 aa21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 JADE2Q9NQC1 790 aa21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 FAM217BQ9NTX9 383 aaPredicted RBP21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 MUC3AQ02505 3323 aa21.59■■□□□ 1.05
NDUFS3-213ENST00000534716 NRCAMQ92823 1304 aa21.58■■□□□ 1.05
NDUFS3-213ENST00000534716 TLL1O43897 1013 aa21.58■■□□□ 1.05
NDUFS3-213ENST00000534716 DEFB103AP81534 67 aa21.58■■□□□ 1.05
NDUFS3-213ENST00000534716 TYW1BQ6NUM6 668 aa21.58■■□□□ 1.05
NDUFS3-213ENST00000534716 TRIM50Q86XT4 487 aa21.58■■□□□ 1.05
NDUFS3-213ENST00000534716 FBXL16Q8N461 479 aa21.58■■□□□ 1.05
NDUFS3-213ENST00000534716 ATXN2LQ8WWM7 1075 aaKnown RBP21.58■■□□□ 1.05
NDUFS3-213ENST00000534716 SETD4Q9NVD3 440 aa21.58■■□□□ 1.05
NDUFS3-213ENST00000534716 REV3LO60673 3130 aa21.58■■□□□ 1.04
NDUFS3-213ENST00000534716 TRIP12Q14669 1992 aaPredicted RBP21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 KLF18A0A0U1RQI7 1052 aa21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 ARHGEF15O94989 841 aa21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 GJB5O95377 273 aa21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 FOSP01100 380 aaPredicted RBP21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 TCF7P36402 384 aaPredicted RBP21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 NAPAP54920 295 aa21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 PLEKHG4Q58EX7 1191 aa21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 RPAINQ86UA6 219 aa21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 SEPT1Q8WYJ6 367 aa21.57■■□□□ 1.04
NDUFS3-213ENST00000534716 RAD9AQ99638 391 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms