RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PCDHA8Q9Y5H6 950 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 MYH8P13535 1937 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 N4BP3O15049 544 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 PPIP5K2O43314 1243 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 TRAPPC3O43617 180 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 MKRN4PQ13434 485 aaPredicted RBP21.07■□□□□ 0.96
SMPD1-210ENST00000534405 SPTY2D1Q68D10 685 aaPredicted RBP21.07■□□□□ 0.96
SMPD1-210ENST00000534405 ARMC9Q7Z3E5 817 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 ARFGAP2Q8N6H7 521 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 STAT6P42226 847 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 PAPOLAP51003 745 aaKnown RBP21.06■□□□□ 0.96
SMPD1-210ENST00000534405 COPB1P53618 953 aaKnown RBP21.06■□□□□ 0.96
SMPD1-210ENST00000534405 ROR2Q01974 943 aaKnown RBP21.06■□□□□ 0.96
SMPD1-210ENST00000534405 PDIA5Q14554 519 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 MREGQ8N565 214 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 TGFBRAP1Q8WUH2 860 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 CCDC43Q96MW1 224 aaKnown RBP21.06■□□□□ 0.96
SMPD1-210ENST00000534405 PSMD1Q99460 953 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 MKNK2Q9HBH9 465 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 ANKIB1Q9P2G1 1089 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 KRT9P35527 623 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 INF2Q27J81 1249 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 TCP11X2Q5H9J9 407 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 FAM182BQ5T319 152 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 CACNA2D3Q8IZS8 1091 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 ZNF513Q8N8E2 541 aaPredicted RBP21.06■□□□□ 0.96
SMPD1-210ENST00000534405 LRRC15Q8TF66 581 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 CNKSR1Q969H4 720 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 PYM1Q9BRP8 204 aaKnown RBP21.06■□□□□ 0.96
SMPD1-210ENST00000534405 CPVLQ9H3G5 476 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 DISC1Q9NRI5 854 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 NOP53Q9NZM5 478 aaKnown RBP21.06■□□□□ 0.96
SMPD1-210ENST00000534405 ROBO3Q96MS0 1386 aa21.06■□□□□ 0.96
SMPD1-210ENST00000534405 TRIM49BA6NDI0 452 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 GCLCP48506 637 aaPredicted RBP21.05■□□□□ 0.96
SMPD1-210ENST00000534405 QPCTQ16769 361 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 HIBCHQ6NVY1 386 aaPredicted RBP21.05■□□□□ 0.96
SMPD1-210ENST00000534405 PIK3R5Q8WYR1 880 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 SLC5A4Q9NY91 659 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 KCNJ18B7U540 433 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 KRT86O43790 486 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 GOLGA8HP0CJ92 632 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 KCNJ12Q14500 433 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 HEATR3Q7Z4Q2 680 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 IRF2BP1Q8IU81 584 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 SPATA4Q8NEY3 305 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 EZH1Q92800 747 aaPredicted RBP21.05■□□□□ 0.96
SMPD1-210ENST00000534405 PLIN2Q99541 437 aa21.05■□□□□ 0.96
SMPD1-210ENST00000534405 CHCHD3Q9NX63 227 aaKnown RBP21.05■□□□□ 0.96
SMPD1-210ENST00000534405 SAP30BPQ9UHR5 308 aaKnown RBP21.05■□□□□ 0.96
SMPD1-210ENST00000534405 CCDC194A0A1B0GVG4 234 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 TSPY3P0CV98 308 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 TSPY8P0CW00 308 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 PMS1P54277 932 aaKnown RBP21.04■□□□□ 0.96
SMPD1-210ENST00000534405 HAUS3Q68CZ6 603 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 ALS2CR12Q96Q35 445 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 TMEM47Q9BQJ4 181 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 RTCBQ9Y3I0 505 aaKnown RBP21.04■□□□□ 0.96
SMPD1-210ENST00000534405 STXBP3O00186 592 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 PYGLP06737 847 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 IDEP14735 1019 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 PDE6BP35913 854 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 KRT83P78385 493 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 SLC7A5Q01650 507 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 LAMB3Q13751 1172 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 DTHD1Q6ZMT9 781 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 MAPKAPK5Q8IW41 473 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 WDR66Q8TBY9 1149 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 JADE2Q9NQC1 790 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 STX8Q9UNK0 236 aa21.04■□□□□ 0.96
SMPD1-210ENST00000534405 PPFIA2O75334 1257 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 RASA1P20936 1047 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 VAV2P52735 878 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 PPP1R7Q15435 360 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 PURBQ96QR8 312 aaKnown RBP21.03■□□□□ 0.96
SMPD1-210ENST00000534405 PAPOLBQ9NRJ5 636 aaKnown RBP21.03■□□□□ 0.96
SMPD1-210ENST00000534405 CCNL1Q9UK58 526 aaPredicted RBP21.03■□□□□ 0.96
SMPD1-210ENST00000534405 SNX12Q9UMY4 172 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 BTAF1O14981 1849 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 ADSSL1Q8N142 457 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 ZFAND2BQ8WV99 257 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 NDST4Q9H3R1 872 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 RMND1Q9NWS8 449 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 BARHL2Q9NY43 387 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 RGL1Q9NZL6 768 aa21.03■□□□□ 0.96
SMPD1-210ENST00000534405 PALM3A6NDB9 673 aaPredicted RBP21.02■□□□□ 0.96
SMPD1-210ENST00000534405 SPDYE3A6NKU9 549 aa21.02■□□□□ 0.96
SMPD1-210ENST00000534405 KLRC4O43908 158 aa21.02■□□□□ 0.96
SMPD1-210ENST00000534405 ARMC3Q5W041 872 aa21.02■□□□□ 0.96
SMPD1-210ENST00000534405 ZNF444Q8N0Y2 327 aaPredicted RBP21.02■□□□□ 0.96
SMPD1-210ENST00000534405 DAGLBQ8NCG7 672 aa21.02■□□□□ 0.96
SMPD1-210ENST00000534405 TCP11L1Q9NUJ3 509 aa21.02■□□□□ 0.96
SMPD1-210ENST00000534405 SLC12A6Q9UHW9 1150 aa21.02■□□□□ 0.96
SMPD1-210ENST00000534405 L3MBTL1Q9Y468 752 aa21.02■□□□□ 0.96
SMPD1-210ENST00000534405 GSTA1P08263 222 aa21.02■□□□□ 0.95
SMPD1-210ENST00000534405 ALADP13716 330 aa21.02■□□□□ 0.95
SMPD1-210ENST00000534405 PRLRP16471 622 aa21.02■□□□□ 0.95
SMPD1-210ENST00000534405 PPP4CP60510 307 aa21.02■□□□□ 0.95
SMPD1-210ENST00000534405 SPAG1Q07617 926 aa21.02■□□□□ 0.95
SMPD1-210ENST00000534405 LMCD1Q9NZU5 365 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms