RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 HNRNPDLO14979 420 aaKnown RBP18.79■□□□□ 0.6
PHRF1-206ENST00000534320 AOC3Q16853 763 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 SUPT20HL1Q3ZLR7 823 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 SBK1Q52WX2 424 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 MB21D1Q8N884 522 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 MAIP1Q8WWC4 291 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 PARVGQ9HBI0 331 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 PCDHA6Q9UN73 950 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 PCDHA8Q9Y5H6 950 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 RBBP5Q15291 538 aaKnown RBP18.79■□□□□ 0.6
PHRF1-206ENST00000534320 MICAL1Q8TDZ2 1067 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 ACCSQ96QU6 501 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 SLIT1O75093 1534 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L15C9J2P7 530 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L13C9JLJ4 530 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L11C9JVI0 530 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L18D6R9N7 530 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L22D6RA61 530 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L17D6RBQ6 530 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L19D6RCP7 530 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L20D6RJB6 530 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L24Q0WX57 530 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 PPFIA1Q13136 1202 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 USP17L6PQ6QN14 398 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 SPTLC3Q9NUV7 552 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 TMEM260Q9NX78 707 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 VIMP08670 466 aaKnown RBP18.79■□□□□ 0.6
PHRF1-206ENST00000534320 MTMR3Q13615 1198 aa18.79■□□□□ 0.6
PHRF1-206ENST00000534320 MFAP3LO75121 409 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 ATP2C1P98194 919 aaPredicted RBP18.78■□□□□ 0.6
PHRF1-206ENST00000534320 ORC2Q13416 577 aaPredicted RBP18.78■□□□□ 0.6
PHRF1-206ENST00000534320 FAM160B1Q5W0V3 765 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 RCSD1Q6JBY9 416 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 CCDC170Q8IYT3 715 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 CABS1Q96KC9 395 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 CRAMP1Q96RY5 1269 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 ZNF341Q9BYN7 854 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 NKIRAS1Q9NYS0 192 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 SUGT1Q9Y2Z0 365 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 USH1CQ9Y6N9 552 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 DHX40Q8IX18 779 aaKnown RBP18.78■□□□□ 0.6
PHRF1-206ENST00000534320 BHMT2Q9H2M3 363 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 P4HA1P13674 534 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 EHHADHQ08426 723 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 KCNB2Q92953 911 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 COMMD10Q9Y6G5 202 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 NDUFA10O95299 355 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 TMEM206Q9H813 350 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 NOD1Q9Y239 953 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
PHRF1-206ENST00000534320 CNTNAP4Q9C0A0 1308 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 FBXO33Q7Z6M2 555 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 PNMA8AQ86V59 439 aaPredicted RBP18.77■□□□□ 0.6
PHRF1-206ENST00000534320 CCDC63Q8NA47 563 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 NHEJ1Q9H9Q4 299 aaPredicted RBP18.77■□□□□ 0.6
PHRF1-206ENST00000534320 TXNDC16Q9P2K2 825 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 FBXO2Q9UK22 296 aaPredicted RBP18.77■□□□□ 0.6
PHRF1-206ENST00000534320 AKR1B1P15121 316 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 LMNB1P20700 586 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 PSMC4P43686 418 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 CTTNQ14247 550 aaKnown RBP18.77■□□□□ 0.6
PHRF1-206ENST00000534320 CROCCP2Q86T23 111 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 ATF5Q9Y2D1 282 aaPredicted RBP18.77■□□□□ 0.6
PHRF1-206ENST00000534320 PPP2R5EQ16537 467 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 CEP85LQ5SZL2 805 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 INTS5Q6P9B9 1019 aaKnown RBP18.77■□□□□ 0.6
PHRF1-206ENST00000534320 CDHR1Q96JP9 859 aa18.77■□□□□ 0.6
PHRF1-206ENST00000534320 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.77■□□□□ 0.6
PHRF1-206ENST00000534320 CTDNEP1O95476 244 aa18.77■□□□□ 0.59
PHRF1-206ENST00000534320 FDPSP14324 419 aaKnown RBP18.77■□□□□ 0.59
PHRF1-206ENST00000534320 CCND2P30279 289 aa18.77■□□□□ 0.59
PHRF1-206ENST00000534320 FAM83BQ5T0W9 1011 aa18.77■□□□□ 0.59
PHRF1-206ENST00000534320 FAM204AQ9H8W3 233 aa18.77■□□□□ 0.59
PHRF1-206ENST00000534320 ANKFY1Q9P2R3 1169 aa18.77■□□□□ 0.59
PHRF1-206ENST00000534320 SPATA31A6Q5VVP1 1343 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 GAS8O95995 478 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 PRCPP42785 496 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 MAP7Q14244 749 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 PPP2R5AQ15172 486 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 PHLDB2Q86SQ0 1253 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 ADGRF4Q8IZF3 695 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 CEP170P1Q96L14 293 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 SPATS2LQ9NUQ6 558 aaKnown RBP18.76■□□□□ 0.59
PHRF1-206ENST00000534320 TRIM49BA6NDI0 452 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 FOXN1O15353 648 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 GUCY2FP51841 1108 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 KCTD2Q14681 263 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 KMT5AQ9NQR1 393 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 TNNC2P02585 160 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 EIF4A3P38919 411 aaKnown RBP18.76■□□□□ 0.59
PHRF1-206ENST00000534320 MFAP3P55082 362 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 NT5C1BQ96P26 610 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 PHF20Q9BVI0 1012 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 SLC7A3Q8WY07 619 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 SENP2Q9HC62 589 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 PIM2Q9P1W9 311 aa18.76■□□□□ 0.59
PHRF1-206ENST00000534320 CCDC144BQ3MJ40 725 aa18.75■□□□□ 0.59
PHRF1-206ENST00000534320 TBC1D10BQ4KMP7 808 aaPredicted RBP18.75■□□□□ 0.59
PHRF1-206ENST00000534320 FAM133AQ8N9E0 248 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms