RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 PPTC7Q8NI37 304 aa16.55■□□□□ 0.24
SF3B2-214ENST00000533595 LENG9Q96B70 501 aa16.55■□□□□ 0.24
SF3B2-214ENST00000533595 SPATA33Q96N06 139 aa16.55■□□□□ 0.24
SF3B2-214ENST00000533595 NAP1L4Q99733 375 aaKnown RBP16.55■□□□□ 0.24
SF3B2-214ENST00000533595 BCAS3Q9H6U6 928 aa16.55■□□□□ 0.24
SF3B2-214ENST00000533595 KIF28PB7ZC32 967 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 CCNT1O60563 726 aaKnown RBP16.54■□□□□ 0.24
SF3B2-214ENST00000533595 KPNA6O60684 536 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 MMP3P08254 477 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.247e-9■□□□□ 10.4
SF3B2-214ENST00000533595 RGS19P49795 217 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 BECN1Q14457 450 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 Q4G0T1 1027 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 MCTP1Q6DN14 999 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 PPP4R3AQ6IN85 833 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 MBOAT7Q96N66 472 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 SDF4Q9BRK5 362 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 ZNF577Q9BSK1 485 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 SENP6Q9GZR1 1112 aaPredicted RBP16.54■□□□□ 0.24
SF3B2-214ENST00000533595 POLR3EQ9NVU0 708 aa16.54■□□□□ 0.24
SF3B2-214ENST00000533595 DDX25Q9UHL0 483 aaKnown RBP16.54■□□□□ 0.24
SF3B2-214ENST00000533595 NFASCO94856 1347 aa16.53■□□□□ 0.24
SF3B2-214ENST00000533595 DOCK5Q9H7D0 1870 aa16.53■□□□□ 0.24
SF3B2-214ENST00000533595 A0A1W2PQ45 241 aaPredicted RBP16.53■□□□□ 0.24
SF3B2-214ENST00000533595 A0A1W2PQY0 241 aa16.53■□□□□ 0.24
SF3B2-214ENST00000533595 IPO5O00410 1097 aaKnown RBP16.53■□□□□ 0.24
SF3B2-214ENST00000533595 NOP56O00567 594 aaKnown RBP16.53■□□□□ 0.24
SF3B2-214ENST00000533595 CABYRO75952 493 aa16.53■□□□□ 0.24
SF3B2-214ENST00000533595 MYL3P08590 195 aa16.53■□□□□ 0.24
SF3B2-214ENST00000533595 ITGB3BPQ13352 177 aaPredicted RBP16.53■□□□□ 0.24
SF3B2-214ENST00000533595 DGKDQ16760 1214 aa16.53■□□□□ 0.24
SF3B2-214ENST00000533595 HSDL1Q3SXM5 330 aa16.53■□□□□ 0.24
SF3B2-214ENST00000533595 CXCL17Q6UXB2 119 aa16.53■□□□□ 0.24
SF3B2-214ENST00000533595 GLT1D1Q96MS3 346 aa16.53■□□□□ 0.24
SF3B2-214ENST00000533595 JPH1Q9HDC5 661 aaPredicted RBP16.53■□□□□ 0.24
SF3B2-214ENST00000533595 VPS37CA5D8V6 355 aaPredicted RBP16.52■□□□□ 0.24
SF3B2-214ENST00000533595 MSH4O15457 936 aa16.52■□□□□ 0.24
SF3B2-214ENST00000533595 PPFIA4O75335 1185 aa16.52■□□□□ 0.24
SF3B2-214ENST00000533595 SYT1P21579 422 aa16.52■□□□□ 0.24
SF3B2-214ENST00000533595 SP4Q02446 784 aa16.52■□□□□ 0.24
SF3B2-214ENST00000533595 SPRYD3Q8NCJ5 442 aa16.52■□□□□ 0.24
SF3B2-214ENST00000533595 VTI1AQ96AJ9 217 aa16.52■□□□□ 0.24
SF3B2-214ENST00000533595 UIMC1Q96RL1 719 aa16.52■□□□□ 0.24
SF3B2-214ENST00000533595 TBC1D22BQ9NU19 505 aa16.52■□□□□ 0.24
SF3B2-214ENST00000533595 SLC9A2Q9UBY0 812 aa16.52■□□□□ 0.24
SF3B2-214ENST00000533595 NOL7Q9UMY1 257 aaKnown RBP16.52■□□□□ 0.24
SF3B2-214ENST00000533595 ELP1O95163 1332 aa16.51■□□□□ 0.23
SF3B2-214ENST00000533595 DHX15O43143 795 aaKnown RBP16.51■□□□□ 0.23
SF3B2-214ENST00000533595 SLC37A4O43826 429 aa16.51■□□□□ 0.23
SF3B2-214ENST00000533595 HOXD8P13378 290 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-214ENST00000533595 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
SF3B2-214ENST00000533595 TRAPPC10P48553 1259 aa16.51■□□□□ 0.23
SF3B2-214ENST00000533595 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
SF3B2-214ENST00000533595 SLC5A5Q92911 643 aa16.51■□□□□ 0.23
SF3B2-214ENST00000533595 GPR20Q99678 358 aa16.51■□□□□ 0.23
SF3B2-214ENST00000533595 MTG1Q9BT17 334 aaPredicted RBP16.51■□□□□ 0.23
SF3B2-214ENST00000533595 STARD7Q9NQZ5 370 aa16.51■□□□□ 0.23
SF3B2-214ENST00000533595 DDX39AO00148 427 aaKnown RBP16.5■□□□□ 0.23
SF3B2-214ENST00000533595 SLC34A2O95436 690 aa16.5■□□□□ 0.23
SF3B2-214ENST00000533595 ETNPPLQ8TBG4 499 aa16.5■□□□□ 0.23
SF3B2-214ENST00000533595 SEPT1Q8WYJ6 367 aa16.5■□□□□ 0.23
SF3B2-214ENST00000533595 RIT2Q99578 217 aa16.5■□□□□ 0.23
SF3B2-214ENST00000533595 HTATIP2Q9BUP3 242 aa16.5■□□□□ 0.23
SF3B2-214ENST00000533595 TCEAL9Q9UHQ7 104 aa16.5■□□□□ 0.23
SF3B2-214ENST00000533595 TELO2Q9Y4R8 837 aa16.5■□□□□ 0.23
SF3B2-214ENST00000533595 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
SF3B2-214ENST00000533595 WNT7AO00755 349 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 TBX3O15119 743 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 STX6O43752 255 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 GAS7O60861 476 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 ATN1P54259 1190 aaPredicted RBP16.49■□□□□ 0.23
SF3B2-214ENST00000533595 ACTR2P61160 394 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 TTC38Q5R3I4 469 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 LRCH2Q5VUJ6 765 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 SLC39A5Q6ZMH5 540 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 FAM20AQ96MK3 541 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 TEKT3Q9BXF9 490 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 KCNMB3Q9NPA1 279 aa16.49■□□□□ 0.23
SF3B2-214ENST00000533595 GSTTP1A0A1W2PQM5 241 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 MARCH6O60337 910 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 NEMFO60524 1076 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 PSMD10O75832 226 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
SF3B2-214ENST00000533595 CCNE2O96020 404 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 LGALS2P05162 132 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 ZNF286BP0CG31 522 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 MCM7P33993 719 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 TCF7P36402 384 aaPredicted RBP16.48■□□□□ 0.23
SF3B2-214ENST00000533595 PSMC6P62333 389 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 KRT76Q01546 638 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 ORC2Q13416 577 aaPredicted RBP16.48■□□□□ 0.23
SF3B2-214ENST00000533595 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
SF3B2-214ENST00000533595 ZNF746Q6NUN9 644 aaPredicted RBP16.48■□□□□ 0.23
SF3B2-214ENST00000533595 BRAPQ7Z569 592 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 FERMT3Q86UX7 667 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 KAT2BQ92831 832 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 GJA10Q969M2 543 aa16.48■□□□□ 0.23
SF3B2-214ENST00000533595 MTMR6Q9Y217 621 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms