RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MEIS1O00470 390 aa23.33■■□□□ 1.33
CCS-208ENST00000533244 DTNBO60941 627 aa23.33■■□□□ 1.33
CCS-208ENST00000533244 NBPF20Q3BBV1 942 aa23.33■■□□□ 1.33
CCS-208ENST00000533244 NIPA1Q7RTP0 329 aa23.33■■□□□ 1.33
CCS-208ENST00000533244 IL27Q8NEV9 243 aa23.33■■□□□ 1.33
CCS-208ENST00000533244 PHF20Q9BVI0 1012 aa23.33■■□□□ 1.33
CCS-208ENST00000533244 KCNH7Q9NS40 1196 aa23.33■■□□□ 1.33
CCS-208ENST00000533244 ORC3Q9UBD5 711 aaPredicted RBP23.33■■□□□ 1.33
CCS-208ENST00000533244 HAS3O00219 553 aa23.33■■□□□ 1.32
CCS-208ENST00000533244 TLR3O15455 904 aaKnown RBP23.33■■□□□ 1.32
CCS-208ENST00000533244 ITGB8P26012 769 aa23.33■■□□□ 1.32
CCS-208ENST00000533244 PTPN11Q06124 597 aaPredicted RBP23.33■■□□□ 1.32
CCS-208ENST00000533244 GPR20Q99678 358 aa23.33■■□□□ 1.32
CCS-208ENST00000533244 TMEM39AQ9NV64 488 aa23.33■■□□□ 1.32
CCS-208ENST00000533244 IGLV3-22A0A075B6J6 115 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 FAM86B1E9PN63 330 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 B4GALT4O60513 344 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 FAM86B2P0C5J1 330 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 SESTD1Q86VW0 696 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 BLIDQ8IZY5 108 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 WASF1Q92558 559 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 ZSCAN31Q96LW9 406 aaPredicted RBP23.32■■□□□ 1.32
CCS-208ENST00000533244 C16orf70Q9BSU1 422 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 BACH2Q9BYV9 841 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 TELO2Q9Y4R8 837 aa23.32■■□□□ 1.32
CCS-208ENST00000533244 TRIOBPQ9H2D6 2365 aa23.31■■□□□ 1.32
CCS-208ENST00000533244 EDIL3O43854 480 aa23.31■■□□□ 1.32
CCS-208ENST00000533244 ZNF286BP0CG31 522 aa23.31■■□□□ 1.32
CCS-208ENST00000533244 ARP10275 920 aa23.31■■□□□ 1.32
CCS-208ENST00000533244 CIITAP33076 1130 aa23.31■■□□□ 1.32
CCS-208ENST00000533244 KATNAL1Q9BW62 490 aa23.31■■□□□ 1.32
CCS-208ENST00000533244 TRPV6Q9H1D0 765 aa23.31■■□□□ 1.32
CCS-208ENST00000533244 NOP56O00567 594 aaKnown RBP23.3■■□□□ 1.32
CCS-208ENST00000533244 JAK2O60674 1132 aa23.3■■□□□ 1.32
CCS-208ENST00000533244 PSEN2P49810 448 aa23.3■■□□□ 1.32
CCS-208ENST00000533244 MDM2Q00987 491 aaPredicted RBP23.3■■□□□ 1.32
CCS-208ENST00000533244 AGO4Q9HCK5 861 aaKnown RBP23.3■■□□□ 1.32
CCS-208ENST00000533244 SH2B1Q9NRF2 756 aaPredicted RBP23.3■■□□□ 1.32
CCS-208ENST00000533244 KCNJ14Q9UNX9 436 aa23.3■■□□□ 1.32
CCS-208ENST00000533244 NFASCO94856 1347 aa23.3■■□□□ 1.32
CCS-208ENST00000533244 A0A1W2PPC1 479 aa23.29■■□□□ 1.32
CCS-208ENST00000533244 LGALS2P05162 132 aa23.29■■□□□ 1.32
CCS-208ENST00000533244 XBP1P17861 261 aa23.29■■□□□ 1.32
CCS-208ENST00000533244 MFSD10Q14728 455 aa23.29■■□□□ 1.32
CCS-208ENST00000533244 BADQ92934 168 aa23.29■■□□□ 1.32
CCS-208ENST00000533244 LBHD1Q9BQE6 289 aaPredicted RBP23.29■■□□□ 1.32
CCS-208ENST00000533244 ALG1Q9BT22 464 aa23.29■■□□□ 1.32
CCS-208ENST00000533244 GJB4Q9NTQ9 266 aa23.29■■□□□ 1.32
CCS-208ENST00000533244 TIMP1P01033 207 aa23.28■■□□□ 1.32
CCS-208ENST00000533244 RAG1P15918 1043 aa23.28■■□□□ 1.32
CCS-208ENST00000533244 ZNF76P36508 570 aa23.28■■□□□ 1.32
CCS-208ENST00000533244 ITGB3BPQ13352 177 aaPredicted RBP23.28■■□□□ 1.32
CCS-208ENST00000533244 HABP4Q5JVS0 413 aaKnown RBP23.28■■□□□ 1.32
CCS-208ENST00000533244 PPP1R13LQ8WUF5 828 aa23.28■■□□□ 1.32
CCS-208ENST00000533244 LLPHQ9BRT6 129 aaKnown RBP23.28■■□□□ 1.32
CCS-208ENST00000533244 TRMT13Q9NUP7 481 aaKnown RBP23.28■■□□□ 1.32
CCS-208ENST00000533244 PKD2L1Q9P0L9 805 aa23.28■■□□□ 1.32
CCS-208ENST00000533244 SUPT20HL2P0C7V6 817 aa23.27■■□□□ 1.32
CCS-208ENST00000533244 USP11P51784 963 aa23.27■■□□□ 1.32
CCS-208ENST00000533244 SETQ01105 290 aaPredicted RBP23.27■■□□□ 1.32
CCS-208ENST00000533244 KIAA0753Q2KHM9 967 aa23.27■■□□□ 1.32
CCS-208ENST00000533244 FAM47CQ5HY64 1035 aa23.27■■□□□ 1.32
CCS-208ENST00000533244 PLA2G4DQ86XP0 818 aa23.27■■□□□ 1.32
CCS-208ENST00000533244 CCDC83Q8IWF9 413 aa23.27■■□□□ 1.32
CCS-208ENST00000533244 LENG9Q96B70 501 aa23.27■■□□□ 1.32
CCS-208ENST00000533244 GSTTP1A0A1W2PQM5 241 aa23.26■■□□□ 1.31
CCS-208ENST00000533244 ST18O60284 1047 aa23.26■■□□□ 1.31
CCS-208ENST00000533244 TBCKQ8TEA7 893 aa23.26■■□□□ 1.31
CCS-208ENST00000533244 SEPT1Q8WYJ6 367 aa23.26■■□□□ 1.31
CCS-208ENST00000533244 CTAGE1Q96RT6 745 aa23.26■■□□□ 1.31
CCS-208ENST00000533244 NOC4LQ9BVI4 516 aaKnown RBP23.26■■□□□ 1.31
CCS-208ENST00000533244 UBE2OQ9C0C9 1292 aaKnown RBP23.26■■□□□ 1.31
CCS-208ENST00000533244 JPH1Q9HDC5 661 aaPredicted RBP23.26■■□□□ 1.31
CCS-208ENST00000533244 GTF2IRD1Q9UHL9 959 aa23.26■■□□□ 1.31
CCS-208ENST00000533244 H3BRB1 525 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 SP4Q02446 784 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 GDF6Q6KF10 455 aaPredicted RBP23.25■■□□□ 1.31
CCS-208ENST00000533244 KRT25Q7Z3Z0 450 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 SDF4Q9BRK5 362 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 TUT1Q9H6E5 874 aaKnown RBP23.25■■□□□ 1.31
CCS-208ENST00000533244 HDAC6Q9UBN7 1215 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 SLC9A2Q9UBY0 812 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 DHX15O43143 795 aaKnown RBP23.25■■□□□ 1.31
CCS-208ENST00000533244 HOXC8P31273 242 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 TCF7P36402 384 aaPredicted RBP23.25■■□□□ 1.31
CCS-208ENST00000533244 MFSD5Q6N075 450 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 TRIM50Q86XT4 487 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 OXER1Q8TDS5 423 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 HIPK3Q9H422 1215 aa23.25■■□□□ 1.31
CCS-208ENST00000533244 CYP3A7-CYP3A51PA0A087WV96 503 aa23.24■■□□□ 1.31
CCS-208ENST00000533244 IPO5O00410 1097 aaKnown RBP23.24■■□□□ 1.31
CCS-208ENST00000533244 CD2BP2O95400 341 aaKnown RBP23.24■■□□□ 1.31
CCS-208ENST00000533244 CYP3A7P24462 503 aa23.24■■□□□ 1.31
CCS-208ENST00000533244 CHMP4BP1P59074 171 aa23.24■■□□□ 1.31
CCS-208ENST00000533244 NONOQ15233 471 aaKnown RBP eCLIP23.24■■□□□ 1.31
CCS-208ENST00000533244 MOXD1Q6UVY6 613 aa23.24■■□□□ 1.31
CCS-208ENST00000533244 C7orf31Q8N865 590 aa23.24■■□□□ 1.31
CCS-208ENST00000533244 MBOAT7Q96N66 472 aa23.24■■□□□ 1.31
CCS-208ENST00000533244 PPP1R12CQ9BZL4 782 aa23.24■■□□□ 1.31
CCS-208ENST00000533244 UMODL1Q5DID0 1318 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms