RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 LRRC8DQ7L1W4 858 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 FBXL16Q8N461 479 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 PHOSPHO2Q8TCD6 241 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 GPR20Q99678 358 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 FTOQ9C0B1 505 aaKnown RBP eCLIP26.91■■□□□ 1.9
SMPD1-209ENST00000533196 GLT8D2Q9H1C3 349 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 TUT1Q9H6E5 874 aaKnown RBP26.91■■□□□ 1.9
SMPD1-209ENST00000533196 PCDHA11Q9Y5I1 949 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 CCDC196A0A1B0GTZ2 297 aa26.9■■□□□ 1.9
SMPD1-209ENST00000533196 MAFGO15525 162 aa26.9■■□□□ 1.9
SMPD1-209ENST00000533196 WWC2Q6AWC2 1192 aa26.9■■□□□ 1.9
SMPD1-209ENST00000533196 MAFAQ8NHW3 353 aaPredicted RBP26.9■■□□□ 1.9
SMPD1-209ENST00000533196 SLC9A7Q96T83 725 aa26.9■■□□□ 1.9
SMPD1-209ENST00000533196 PCDHA6Q9UN73 950 aa26.9■■□□□ 1.9
SMPD1-209ENST00000533196 PCDHA8Q9Y5H6 950 aa26.9■■□□□ 1.9
SMPD1-209ENST00000533196 SNX14Q9Y5W7 946 aa26.9■■□□□ 1.9
SMPD1-209ENST00000533196 FOSP01100 380 aaPredicted RBP26.89■■□□□ 1.9
SMPD1-209ENST00000533196 CKBP12277 381 aa26.89■■□□□ 1.9
SMPD1-209ENST00000533196 ATP2A2P16615 1042 aaKnown RBP26.89■■□□□ 1.9
SMPD1-209ENST00000533196 HOXC8P31273 242 aa26.89■■□□□ 1.9
SMPD1-209ENST00000533196 UBE2SQ16763 222 aa26.89■■□□□ 1.9
SMPD1-209ENST00000533196 BLOC1S2Q6QNY1 142 aa26.89■■□□□ 1.9
SMPD1-209ENST00000533196 JAKMIP1Q96N16 626 aaKnown RBP26.89■■□□□ 1.9
SMPD1-209ENST00000533196 BCAS3Q9H6U6 928 aa26.89■■□□□ 1.9
SMPD1-209ENST00000533196 SLC28A3Q9HAS3 691 aa26.89■■□□□ 1.9
SMPD1-209ENST00000533196 RIC8AQ9NPQ8 531 aa26.89■■□□□ 1.9
SMPD1-209ENST00000533196 ZNF215Q9UL58 517 aaPredicted RBP26.89■■□□□ 1.9
SMPD1-209ENST00000533196 V9GY48 417 aaPredicted RBP26.89■■□□□ 1.9
SMPD1-209ENST00000533196 CXCL10P02778 98 aa26.88■■□□□ 1.89
SMPD1-209ENST00000533196 PSMA5P28066 241 aa26.88■■□□□ 1.89
SMPD1-209ENST00000533196 NAPAP54920 295 aa26.88■■□□□ 1.89
SMPD1-209ENST00000533196 TRIM71Q2Q1W2 868 aaKnown RBP26.88■■□□□ 1.89
SMPD1-209ENST00000533196 UBIAD1Q9Y5Z9 338 aa26.88■■□□□ 1.89
SMPD1-209ENST00000533196 CDH23Q9H251 3354 aa26.88■■□□□ 1.89
SMPD1-209ENST00000533196 C17orf102A2RUQ5 167 aa26.87■■□□□ 1.89
SMPD1-209ENST00000533196 Q6ZUG5 572 aa26.87■■□□□ 1.89
SMPD1-209ENST00000533196 SERINC5Q86VE9 423 aa26.87■■□□□ 1.89
SMPD1-209ENST00000533196 NKX2-4Q9H2Z4 354 aa26.87■■□□□ 1.89
SMPD1-209ENST00000533196 FAM217BQ9NTX9 383 aaPredicted RBP26.87■■□□□ 1.89
SMPD1-209ENST00000533196 BARHL2Q9NY43 387 aa26.87■■□□□ 1.89
SMPD1-209ENST00000533196 YBX2Q9Y2T7 364 aaKnown RBP26.87■■□□□ 1.89
SMPD1-209ENST00000533196 NID2Q14112 1375 aa26.86■■□□□ 1.89
SMPD1-209ENST00000533196 KCNA2P16389 499 aa26.86■■□□□ 1.89
SMPD1-209ENST00000533196 ITGB5P18084 799 aa26.86■■□□□ 1.89
SMPD1-209ENST00000533196 CDC27P30260 824 aa26.86■■□□□ 1.89
SMPD1-209ENST00000533196 METAP2P50579 478 aaKnown RBP eCLIP26.86■■□□□ 1.89
SMPD1-209ENST00000533196 GAS2L1Q99501 681 aaPredicted RBP26.86■■□□□ 1.89
SMPD1-209ENST00000533196 AGXT2Q9BYV1 514 aa26.86■■□□□ 1.89
SMPD1-209ENST00000533196 JADE2Q9NQC1 790 aa26.86■■□□□ 1.89
SMPD1-209ENST00000533196 STXBP3O00186 592 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 SMIM10L2AP0DMW4 78 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 SMIM10L2BP0DMW5 78 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 GNAT1P11488 350 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 ADCY7P51828 1080 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 MTMR1Q13613 665 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 GPNMBQ14956 572 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 CNKSR3Q6P9H4 555 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 BRF1Q92994 677 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 ATP6V0A1Q93050 837 aa26.85■■□□□ 1.89
SMPD1-209ENST00000533196 EFCAB14O75071 495 aa26.84■■□□□ 1.89
SMPD1-209ENST00000533196 CAND2O75155 1236 aa26.84■■□□□ 1.89
SMPD1-209ENST00000533196 RPS6KB1P23443 525 aa26.84■■□□□ 1.89
SMPD1-209ENST00000533196 ZNF200P98182 395 aaPredicted RBP26.84■■□□□ 1.89
SMPD1-209ENST00000533196 AP3B2Q13367 1082 aa26.84■■□□□ 1.89
SMPD1-209ENST00000533196 HIC1Q14526 733 aa26.84■■□□□ 1.89
SMPD1-209ENST00000533196 TYW1BQ6NUM6 668 aa26.84■■□□□ 1.89
SMPD1-209ENST00000533196 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.84■■□□□ 1.89
SMPD1-209ENST00000533196 RNPEPQ9H4A4 650 aa26.84■■□□□ 1.89
SMPD1-209ENST00000533196 NAP1L2Q9ULW6 460 aaPredicted RBP26.84■■□□□ 1.89
SMPD1-209ENST00000533196 EMSYQ7Z589 1322 aa26.84■■□□□ 1.89
SMPD1-209ENST00000533196 SMCO2A6NFE2 343 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 NBNO60934 754 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 ATP9AO75110 1047 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 CPA1P15085 419 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 KCNJ6P48051 423 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 RABGGTBP53611 331 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 APOBRQ0VD83 1088 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 PFKFB3Q16875 520 aaPredicted RBP26.83■■□□□ 1.89
SMPD1-209ENST00000533196 ZNF618Q5T7W0 954 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 TRAF7Q6Q0C0 670 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 SEPT1Q8WYJ6 367 aa26.83■■□□□ 1.89
SMPD1-209ENST00000533196 KIF28PB7ZC32 967 aa26.82■■□□□ 1.88
SMPD1-209ENST00000533196 ADD1P35611 737 aaKnown RBP26.82■■□□□ 1.88
SMPD1-209ENST00000533196 UTP14CQ5TAP6 766 aaKnown RBP26.82■■□□□ 1.88
SMPD1-209ENST00000533196 PPP2R2DQ66LE6 453 aa26.82■■□□□ 1.88
SMPD1-209ENST00000533196 CCDC12Q8WUD4 166 aaPredicted RBP26.82■■□□□ 1.88
SMPD1-209ENST00000533196 WNT8BQ93098 351 aa26.82■■□□□ 1.88
SMPD1-209ENST00000533196 MXRA8Q9BRK3 442 aa26.82■■□□□ 1.88
SMPD1-209ENST00000533196 ANO3Q9BYT9 981 aa26.82■■□□□ 1.88
SMPD1-209ENST00000533196 PRDM12Q9H4Q4 367 aa26.82■■□□□ 1.88
SMPD1-209ENST00000533196 ABHD14A-ACY1A0A1B0GW23 586 aa26.81■■□□□ 1.88
SMPD1-209ENST00000533196 TCF7P36402 384 aaPredicted RBP26.81■■□□□ 1.88
SMPD1-209ENST00000533196 ERICH6BQ5W0A0 696 aa26.81■■□□□ 1.88
SMPD1-209ENST00000533196 MCTP2Q6DN12 878 aa26.81■■□□□ 1.88
SMPD1-209ENST00000533196 HERC6Q8IVU3 1022 aa26.81■■□□□ 1.88
SMPD1-209ENST00000533196 ESYT2A0FGR8 921 aa26.8■■□□□ 1.88
SMPD1-209ENST00000533196 RSPH10B2B2RC85 870 aa26.8■■□□□ 1.88
SMPD1-209ENST00000533196 RSPH10BP0C881 870 aa26.8■■□□□ 1.88
SMPD1-209ENST00000533196 SCG2P13521 617 aa26.8■■□□□ 1.88
SMPD1-209ENST00000533196 THPOP40225 353 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms