RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PHKBQ93100 1093 aa34.67■■■■□ 3.14
SSSCA1-207ENST00000533115 PGBD1Q96JS3 809 aa34.67■■■■□ 3.14
SSSCA1-207ENST00000533115 JADE2Q9NQC1 790 aa34.67■■■■□ 3.14
SSSCA1-207ENST00000533115 HSFX4A0A1B0GTS1 333 aaPredicted RBP34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 HSFX3A0A1B0GWH4 333 aaPredicted RBP34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 CLK2P49760 499 aaKnown RBP34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 AKAP17AQ02040 695 aaKnown RBP34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 AP3B2Q13367 1082 aa34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 MTMR1Q13613 665 aa34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 HERVK_113Q902F9 699 aa34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 ANO3Q9BYT9 981 aa34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 NCOA5Q9HCD5 579 aaKnown RBP34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 MTMR10Q9NXD2 777 aa34.66■■■■□ 3.14
SSSCA1-207ENST00000533115 H3BRB1 525 aa34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 MAFGO15525 162 aa34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 ATP9AO75110 1047 aa34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 KCNA2P16389 499 aa34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 IFNAR1P17181 557 aa34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 CCDC155Q8N6L0 562 aa34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 CCDC12Q8WUD4 166 aaPredicted RBP34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 RNF26Q9BY78 433 aaPredicted RBP34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 TUT1Q9H6E5 874 aaKnown RBP34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 PDRG1Q9NUG6 133 aa34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 TMEM260Q9NX78 707 aa34.65■■■■□ 3.14
SSSCA1-207ENST00000533115 ESYT2A0FGR8 921 aa34.64■■■■□ 3.14
SSSCA1-207ENST00000533115 CAGE1Q8TC20 777 aa34.64■■■■□ 3.14
SSSCA1-207ENST00000533115 VWCEQ96DN2 955 aa34.64■■■■□ 3.14
SSSCA1-207ENST00000533115 ZNF274Q96GC6 653 aaPredicted RBP34.64■■■■□ 3.14
SSSCA1-207ENST00000533115 TELO2Q9Y4R8 837 aa34.64■■■■□ 3.14
SSSCA1-207ENST00000533115 PFKMP08237 780 aa34.63■■■■□ 3.13
SSSCA1-207ENST00000533115 IQCF3P0C7M6 154 aa34.63■■■■□ 3.13
SSSCA1-207ENST00000533115 RFC2P35250 354 aa34.63■■■■□ 3.13
SSSCA1-207ENST00000533115 SP4Q02446 784 aa34.63■■■■□ 3.13
SSSCA1-207ENST00000533115 ZNF697Q5TEC3 545 aa34.63■■■■□ 3.13
SSSCA1-207ENST00000533115 MXRA8Q9BRK3 442 aa34.63■■■■□ 3.13
SSSCA1-207ENST00000533115 SLC26A6Q9BXS9 759 aa34.63■■■■□ 3.13
SSSCA1-207ENST00000533115 ZMYND12Q9H0C1 365 aa34.63■■■■□ 3.13
SSSCA1-207ENST00000533115 MTIF3Q9H2K0 278 aaKnown RBP34.63■■■■□ 3.13
SSSCA1-207ENST00000533115 PPFIA3O75145 1194 aa34.62■■■■□ 3.13
SSSCA1-207ENST00000533115 OTOP2Q7RTS6 562 aa34.62■■■■□ 3.13
SSSCA1-207ENST00000533115 DHX38Q92620 1227 aaKnown RBP34.62■■■■□ 3.13
SSSCA1-207ENST00000533115 LARP6Q9BRS8 491 aaKnown RBP34.62■■■■□ 3.13
SSSCA1-207ENST00000533115 C6orf50Q9HD87 102 aa34.62■■■■□ 3.13
SSSCA1-207ENST00000533115 SREBF1P36956 1147 aa34.61■■■■□ 3.13
SSSCA1-207ENST00000533115 DEFB128Q7Z7B8 93 aa34.61■■■■□ 3.13
SSSCA1-207ENST00000533115 AFAP1L1Q8TED9 768 aa34.61■■■■□ 3.13
SSSCA1-207ENST00000533115 PKD2L1Q9P0L9 805 aa34.61■■■■□ 3.13
SSSCA1-207ENST00000533115 CXXC1Q9P0U4 656 aaPredicted RBP34.61■■■■□ 3.13
SSSCA1-207ENST00000533115 ANAPC15P60006 121 aa34.6■■■■□ 3.13
SSSCA1-207ENST00000533115 ZNF200P98182 395 aaPredicted RBP34.6■■■■□ 3.13
SSSCA1-207ENST00000533115 PTK7Q13308 1070 aa34.6■■■■□ 3.13
SSSCA1-207ENST00000533115 UTP14CQ5TAP6 766 aaKnown RBP34.6■■■■□ 3.13
SSSCA1-207ENST00000533115 JAKMIP3Q5VZ66 844 aa34.6■■■■□ 3.13
SSSCA1-207ENST00000533115 TANC1Q9C0D5 1861 aa34.6■■■■□ 3.13
SSSCA1-207ENST00000533115 SCN5AQ14524 2016 aa34.6■■■■□ 3.13
SSSCA1-207ENST00000533115 RBL2Q08999 1139 aa34.59■■■■□ 3.13
SSSCA1-207ENST00000533115 HIC1Q14526 733 aa34.59■■■■□ 3.13
SSSCA1-207ENST00000533115 CEP55Q53EZ4 464 aa34.59■■■■□ 3.13
SSSCA1-207ENST00000533115 CYP2W1Q8TAV3 490 aa34.59■■■■□ 3.13
SSSCA1-207ENST00000533115 FAM161BQ96MY7 647 aa34.59■■■■□ 3.13
SSSCA1-207ENST00000533115 KCNH7Q9NS40 1196 aa34.59■■■■□ 3.13
SSSCA1-207ENST00000533115 TRIP12Q14669 1992 aaPredicted RBP34.59■■■■□ 3.13
SSSCA1-207ENST00000533115 C17orf102A2RUQ5 167 aa34.58■■■■□ 3.13
SSSCA1-207ENST00000533115 EIF5BO60841 1220 aaKnown RBP34.58■■■■□ 3.13
SSSCA1-207ENST00000533115 SMIM10L2AP0DMW4 78 aa34.58■■■■□ 3.13
SSSCA1-207ENST00000533115 SMIM10L2BP0DMW5 78 aa34.58■■■■□ 3.13
SSSCA1-207ENST00000533115 GNA11P29992 359 aa34.58■■■■□ 3.13
SSSCA1-207ENST00000533115 MCTP2Q6DN12 878 aa34.58■■■■□ 3.13
SSSCA1-207ENST00000533115 TRIM50Q86XT4 487 aa34.58■■■■□ 3.13
SSSCA1-207ENST00000533115 ZNF215Q9UL58 517 aaPredicted RBP34.58■■■■□ 3.13
SSSCA1-207ENST00000533115 SELPP16109 830 aa34.57■■■■□ 3.12
SSSCA1-207ENST00000533115 HOXC8P31273 242 aa34.57■■■■□ 3.12
SSSCA1-207ENST00000533115 TCF7P36402 384 aaPredicted RBP34.57■■■■□ 3.12
SSSCA1-207ENST00000533115 ARHGAP4P98171 946 aa34.57■■■■□ 3.12
SSSCA1-207ENST00000533115 REXO1Q8N1G1 1221 aaKnown RBP34.57■■■■□ 3.12
SSSCA1-207ENST00000533115 CCDC148Q8NFR7 591 aa34.57■■■■□ 3.12
SSSCA1-207ENST00000533115 SEPT1Q8WYJ6 367 aa34.57■■■■□ 3.12
SSSCA1-207ENST00000533115 SEMA6BQ9H3T3 888 aa34.57■■■■□ 3.12
SSSCA1-207ENST00000533115 GRXCR1A8MXD5 290 aa34.56■■■■□ 3.12
SSSCA1-207ENST00000533115 CPLX1O14810 134 aa34.56■■■■□ 3.12
SSSCA1-207ENST00000533115 ADAMTS3O15072 1205 aa34.56■■■■□ 3.12
SSSCA1-207ENST00000533115 CKBP12277 381 aa34.56■■■■□ 3.12
SSSCA1-207ENST00000533115 SSRP1Q08945 709 aaKnown RBP34.56■■■■□ 3.12
SSSCA1-207ENST00000533115 STK3Q13188 491 aa34.56■■■■□ 3.12
SSSCA1-207ENST00000533115 LRRC8DQ7L1W4 858 aa34.56■■■■□ 3.12
SSSCA1-207ENST00000533115 TRIM22Q8IYM9 498 aa34.56■■■■□ 3.12
SSSCA1-207ENST00000533115 RNPEPQ9H4A4 650 aa34.56■■■■□ 3.12
SSSCA1-207ENST00000533115 TMEM265A0A087WTH1 108 aa34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 GSTTP1A0A1W2PQM5 241 aa34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 MEIS1O00470 390 aa34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 ARP10275 920 aa34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 DNAJB2P25686 324 aa34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 ZNF76P36508 570 aa34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 TRIM71Q2Q1W2 868 aaKnown RBP34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 BICD2Q8TD16 824 aa34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 GUCD1Q96NT3 240 aa34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 TTYH1Q9H313 450 aaPredicted RBP34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 VPS54Q9P1Q0 977 aa34.55■■■■□ 3.12
SSSCA1-207ENST00000533115 ACTN1P12814 892 aa34.54■■■■□ 3.12
SSSCA1-207ENST00000533115 SERINC5Q86VE9 423 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms