RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 CCDC155Q8N6L0 562 aa9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 SCFD1Q8WVM8 642 aa9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 SECISBP2LQ93073 1101 aaKnown RBP9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 MASTLQ96GX5 879 aa9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 CCDC42Q96M95 316 aa9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 PCMTD1Q96MG8 357 aaPredicted RBP9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 CEP63Q96MT8 703 aa9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 TSG101Q99816 390 aa9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 GBP3Q9H0R5 595 aa9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 KANSL2Q9H9L4 492 aa9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 COL4A3BPQ9Y5P4 624 aa9.19□□□□□ -0.94
TRIM53BP-201ENST00000532912 ZC3H4Q9UPT8 1303 aaKnown RBP9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 ZNF185O15231 689 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 TLR2O60603 784 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 IPO7O95373 1038 aaKnown RBP9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 PRLRP16471 622 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 PDE6BP35913 854 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 CACNB3P54284 484 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 ATP2B2Q01814 1243 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 ITIH3Q06033 890 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 CKAP4Q07065 602 aaKnown RBP9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 CASP8Q14790 479 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 Q4G0T1 1027 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 STRIP1Q5VSL9 837 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 DPY19L2P1Q6NXN4 242 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 CREG2Q8IUH2 290 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 GMCL1P1Q8NEA9 526 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 SMCR8Q8TEV9 937 aaPredicted RBP9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 SYN2Q92777 582 aaPredicted RBP9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 IFIH1Q9BYX4 1025 aaKnown RBP9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 MMRN2Q9H8L6 949 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 DBNDD1Q9H9R9 158 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 MLXIPQ9HAP2 919 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 PDE11AQ9HCR9 933 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 PSD3Q9NYI0 1048 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 PI4KBQ9UBF8 816 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 SALL4Q9UJQ4 1053 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 SNX12Q9UMY4 172 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 KIAA1024Q9UPX6 916 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 PCDHA1Q9Y5I3 950 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 ATRNL1Q5VV63 1379 aa9.18□□□□□ -0.94
TRIM53BP-201ENST00000532912 COL2A1P02458 1487 aaPredicted RBP9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 NPHP3-ACAD11A0A0J9YXS1 232 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 MACROD2A1Z1Q3 448 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 LRRIQ3A6PVS8 624 aaPredicted RBP9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 OPLAHO14841 1288 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 TBX3O15119 743 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 SPATA31C1P0DKV0 1188 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 CIITAP33076 1130 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 STAT3P40763 770 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 SLC1A4P43007 532 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 JAG1P78504 1218 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 ARHGAP4P98171 946 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 SPA17Q15506 151 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 CERKLQ49MI3 558 aaPredicted RBP9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 RRAGAQ7L523 313 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 EPM2AIP1Q7L775 607 aaPredicted RBP9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 GPBP1Q86WP2 473 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 CCDC65Q8IXS2 484 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 SLFN12Q8IYM2 578 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 TRIM58Q8NG06 486 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 GMCL1Q96IK5 515 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 QTRT2Q9H974 415 aaKnown RBP9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 CEP72Q9P209 647 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 JRKLQ9Y4A0 524 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 MYH10P35580 1976 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 SLX4Q8IY92 1834 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 TRAF5O00463 557 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 MOCS3O95396 460 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 GNA14O95837 355 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 NDUFB10O96000 172 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 HSPA1LP34931 641 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 HOXD13P35453 343 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 SREBF1P36956 1147 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 ICA1Q05084 483 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 TCP10Q12799 353 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 EDRF1Q3B7T1 1238 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 BTNL9Q6UXG8 535 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 TMEM179Q6ZVK1 233 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 CATSPER3Q86XQ3 398 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 KIAA0825Q8IV33 1275 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 MMGT1Q8N4V1 131 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 NEK11Q8NG66 645 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 CAPZA3Q96KX2 299 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 GANQ9H2C0 597 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 VIPAS39Q9H9C1 493 aa9.17□□□□□ -0.94
TRIM53BP-201ENST00000532912 RBBP6Q7Z6E9 1792 aaKnown RBP9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 POTEFA5A3E0 1075 aa9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 FAM86B1E9PN63 330 aa9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 F5H6K3 240 aa9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 USO1O60763 962 aaKnown RBP9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 N4BP1O75113 896 aaKnown RBP9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 TACC1O75410 805 aa9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 MMP10P09238 476 aa9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 FAM86B2P0C5J1 330 aa9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 MYBL2P10244 700 aa9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 ERCC3P19447 782 aa9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 HMGB2P26583 209 aaKnown RBP9.16□□□□□ -0.94
TRIM53BP-201ENST00000532912 RPA1P27694 616 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms