RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 SALL4Q9UJQ4 1053 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 PLAGL2Q9UPG8 496 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 PALM3A6NDB9 673 aaPredicted RBP16.38■□□□□ 0.21
NXF1-213ENST00000532297 SLC10A5Q5PT55 438 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 CYB5D1Q6P9G0 228 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 ARHGEF1Q92888 912 aaKnown RBP16.38■□□□□ 0.21
NXF1-213ENST00000532297 P2RX5Q93086 422 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 BUB1O43683 1085 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 MYL1P05976 194 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 CDK8P49336 464 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 DNA2P51530 1060 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 TMC4Q7Z404 712 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 MREGQ8N565 214 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 SCLT1Q96NL6 688 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 ACTR5Q9H9F9 607 aaPredicted RBP16.37■□□□□ 0.21
NXF1-213ENST00000532297 DDX20Q9UHI6 824 aaKnown RBP16.37■□□□□ 0.21
NXF1-213ENST00000532297 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 PLAAQ9Y263 795 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 F8W031 263 aaPredicted RBP16.37■□□□□ 0.21
NXF1-213ENST00000532297 MAGEA1P43355 309 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 GNAQP50148 359 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 PICALMQ13492 652 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 KCNK18Q7Z418 384 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 ERGIC2Q96RQ1 377 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
NXF1-213ENST00000532297 ANKRD2Q9GZV1 360 aa16.37■□□□□ 0.21
NXF1-213ENST00000532297 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.37■□□□□ 0.21
NXF1-213ENST00000532297 FAM170AA1A519 330 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 GOLGA6L10A6NI86 522 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 GCFC2P16383 781 aaKnown RBP16.36■□□□□ 0.21
NXF1-213ENST00000532297 UBE2SQ16763 222 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 KLHDC7AQ5VTJ3 777 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 FAM114A1Q8IWE2 563 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 DHTKD1Q96HY7 919 aaPredicted RBP16.36■□□□□ 0.21
NXF1-213ENST00000532297 CCSER1Q9C0I3 900 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 TMCO5BA8MYB1 307 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
NXF1-213ENST00000532297 FUKQ8N0W3 1084 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 CASKIN2Q8WXE0 1202 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 MTMR8Q96EF0 704 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 HAUS2Q9NVX0 235 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 TBC1D7Q9P0N9 293 aa16.36■□□□□ 0.21
NXF1-213ENST00000532297 CCDC189A1A4V9 331 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 MYMKA6NI61 221 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 DNM1LO00429 736 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
NXF1-213ENST00000532297 GPSM2P81274 684 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 RASSF7Q02833 373 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
NXF1-213ENST00000532297 TRADDQ15628 312 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 SPRED3Q2MJR0 410 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 KRT12Q99456 494 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 FGFBP2Q9BYJ0 223 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 OSBPL7Q9BZF2 842 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 TCP11L1Q9NUJ3 509 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 GMNCA6NCL1 334 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 EDIL3O43854 480 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 LCA5LO95447 670 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 EZRP15311 586 aaKnown RBP16.35■□□□□ 0.21
NXF1-213ENST00000532297 GRB10Q13322 594 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 E2F5Q15329 346 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 TPTE2Q6XPS3 522 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 FAM228AQ86W67 206 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 ARFGAP2Q8N6H7 521 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 WHAMMQ8TF30 809 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 CCDC47Q96A33 483 aaKnown RBP16.35■□□□□ 0.21
NXF1-213ENST00000532297 SGSM3Q96HU1 749 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 NOX5Q96PH1 765 aa16.35■□□□□ 0.21
NXF1-213ENST00000532297 BICDL2A1A5D9 508 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 SRRM3A6NNA2 597 aaPredicted RBP16.34■□□□□ 0.21
NXF1-213ENST00000532297 LAD1O00515 517 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 ECM2O94769 699 aaPredicted RBP16.34■□□□□ 0.21
NXF1-213ENST00000532297 CCNE1P24864 410 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 GALNT17Q6IS24 598 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 CCDC50Q8IVM0 306 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 ZSCAN29Q8IWY8 852 aaPredicted RBP16.34■□□□□ 0.21
NXF1-213ENST00000532297 C1orf131Q8NDD1 294 aaKnown RBP16.34■□□□□ 0.21
NXF1-213ENST00000532297 C8orf37Q96NL8 207 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 BLOC1S4Q9NUP1 217 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 CLSTN1O94985 981 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 ECM1Q16610 540 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 PNMA5Q96PV4 448 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 MXD3Q9BW11 206 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 ZMYND12Q9H0C1 365 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 MMRN2Q9H8L6 949 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 TMBIM4Q9HC24 238 aa16.34■□□□□ 0.21
NXF1-213ENST00000532297 CCNL1Q9UK58 526 aaPredicted RBP16.34■□□□□ 0.21
NXF1-213ENST00000532297 ATP2C2O75185 946 aa16.33■□□□□ 0.21
NXF1-213ENST00000532297 UFL1O94874 794 aa16.33■□□□□ 0.21
NXF1-213ENST00000532297 MRPL12P52815 198 aaKnown RBP16.33■□□□□ 0.21
NXF1-213ENST00000532297 RNASE9P60153 205 aaKnown RBP16.33■□□□□ 0.21
NXF1-213ENST00000532297 GFPT1Q06210 699 aaPredicted RBP16.33■□□□□ 0.21
NXF1-213ENST00000532297 ENOX2Q16206 610 aaKnown RBP16.33■□□□□ 0.21
NXF1-213ENST00000532297 QPCTQ16769 361 aa16.33■□□□□ 0.21
NXF1-213ENST00000532297 ANKRD20A8PQ5CZ79 823 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms