RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 MOXD2PA6NHM9 499 aa25.25■■□□□ 1.63
LRRK1-208ENST00000532029 A6NJR5 290 aa25.25■■□□□ 1.63
LRRK1-208ENST00000532029 IPO5O00410 1097 aaKnown RBP25.25■■□□□ 1.63
LRRK1-208ENST00000532029 NOP56O00567 594 aaKnown RBP25.25■■□□□ 1.63
LRRK1-208ENST00000532029 CTAGE5O15320 804 aa25.25■■□□□ 1.63
LRRK1-208ENST00000532029 STX6O43752 255 aa25.25■■□□□ 1.63
LRRK1-208ENST00000532029 PDIA4P13667 645 aaKnown RBP25.25■■□□□ 1.63
LRRK1-208ENST00000532029 TRAPPC10P48553 1259 aa25.25■■□□□ 1.63
LRRK1-208ENST00000532029 KCNA10Q16322 511 aa25.25■■□□□ 1.63
LRRK1-208ENST00000532029 PPTC7Q8NI37 304 aa25.25■■□□□ 1.63
LRRK1-208ENST00000532029 TCEAL9Q9UHQ7 104 aa25.25■■□□□ 1.63
LRRK1-208ENST00000532029 NFASCO94856 1347 aa25.25■■□□□ 1.63
LRRK1-208ENST00000532029 MSH4O15457 936 aa25.24■■□□□ 1.63
LRRK1-208ENST00000532029 SP4Q02446 784 aa25.24■■□□□ 1.63
LRRK1-208ENST00000532029 ITGB3BPQ13352 177 aaPredicted RBP25.24■■□□□ 1.63
LRRK1-208ENST00000532029 UIMC1Q96RL1 719 aa25.24■■□□□ 1.63
LRRK1-208ENST00000532029 BCAS3Q9H6U6 928 aa25.24■■□□□ 1.63
LRRK1-208ENST00000532029 JPH1Q9HDC5 661 aaPredicted RBP25.24■■□□□ 1.63
LRRK1-208ENST00000532029 TBC1D22BQ9NU19 505 aa25.24■■□□□ 1.63
LRRK1-208ENST00000532029 POLR3EQ9NVU0 708 aa25.24■■□□□ 1.63
LRRK1-208ENST00000532029 KIAA0100Q14667 2235 aaKnown RBP25.24■■□□□ 1.63
LRRK1-208ENST00000532029 SLC37A4O43826 429 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 MARCH6O60337 910 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 ASGR1P07306 291 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 MMP3P08254 477 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 MYL3P08590 195 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 MNX1P50219 401 aaPredicted RBP25.23■■□□□ 1.63
LRRK1-208ENST00000532029 ACLYP53396 1101 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 HSDL1Q3SXM5 330 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 CCSAPQ6IQ19 270 aaPredicted RBP25.23■■□□□ 1.63
LRRK1-208ENST00000532029 NECAB2Q7Z6G3 386 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 FERMT3Q86UX7 667 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 DIS3LQ8TF46 1054 aaKnown RBP25.23■■□□□ 1.63
LRRK1-208ENST00000532029 PAWRQ96IZ0 340 aaKnown RBP25.23■■□□□ 1.63
LRRK1-208ENST00000532029 SLC9A2Q9UBY0 812 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 PHF24Q9UPV7 400 aa25.23■■□□□ 1.63
LRRK1-208ENST00000532029 DDX39AO00148 427 aaKnown RBP25.22■■□□□ 1.63
LRRK1-208ENST00000532029 KPNA6O60684 536 aa25.22■■□□□ 1.63
LRRK1-208ENST00000532029 DGKDQ16760 1214 aa25.22■■□□□ 1.63
LRRK1-208ENST00000532029 TTC38Q5R3I4 469 aa25.22■■□□□ 1.63
LRRK1-208ENST00000532029 BRAPQ7Z569 592 aa25.22■■□□□ 1.63
LRRK1-208ENST00000532029 SLC5A5Q92911 643 aa25.22■■□□□ 1.63
LRRK1-208ENST00000532029 C11orf49Q9H6J7 331 aa25.22■■□□□ 1.63
LRRK1-208ENST00000532029 DAXXQ9UER7 740 aaPredicted RBP25.22■■□□□ 1.63
LRRK1-208ENST00000532029 MTMR6Q9Y217 621 aa25.22■■□□□ 1.63
LRRK1-208ENST00000532029 CENPFP49454 3210 aa25.22■■□□□ 1.63
LRRK1-208ENST00000532029 CABYRO75952 493 aa25.21■■□□□ 1.63
LRRK1-208ENST00000532029 BAG4O95429 457 aaKnown RBP25.21■■□□□ 1.63
LRRK1-208ENST00000532029 MCM7P33993 719 aa25.21■■□□□ 1.63
LRRK1-208ENST00000532029 ORC2Q13416 577 aaPredicted RBP25.21■■□□□ 1.63
LRRK1-208ENST00000532029 RILPL1Q5EBL4 403 aa25.21■■□□□ 1.63
LRRK1-208ENST00000532029 POTEDQ86YR6 584 aa25.21■■□□□ 1.63
LRRK1-208ENST00000532029 FERMT2Q96AC1 680 aa25.21■■□□□ 1.63
LRRK1-208ENST00000532029 RIT2Q99578 217 aa25.21■■□□□ 1.63
LRRK1-208ENST00000532029 TEKT3Q9BXF9 490 aa25.21■■□□□ 1.63
LRRK1-208ENST00000532029 WNT7AO00755 349 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 TBX3O15119 743 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 NEMFO60524 1076 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 GAS7O60861 476 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 PPFIA4O75335 1185 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 MLLT1Q03111 559 aaPredicted RBP25.2■■□□□ 1.62
LRRK1-208ENST00000532029 ZNF174Q15697 407 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 LRCH2Q5VUJ6 765 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 CXCL17Q6UXB2 119 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 ETNPPLQ8TBG4 499 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 VTI1AQ96AJ9 217 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 FAM20AQ96MK3 541 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 GLT1D1Q96MS3 346 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 GPR20Q99678 358 aa25.2■■□□□ 1.62
LRRK1-208ENST00000532029 SENP6Q9GZR1 1112 aaPredicted RBP25.2■■□□□ 1.62
LRRK1-208ENST00000532029 A0A1W2PQ45 241 aaPredicted RBP25.19■■□□□ 1.62
LRRK1-208ENST00000532029 A0A1W2PQY0 241 aa25.19■■□□□ 1.62
LRRK1-208ENST00000532029 DHX15O43143 795 aaKnown RBP25.19■■□□□ 1.62
LRRK1-208ENST00000532029 KRT76Q01546 638 aa25.19■■□□□ 1.62
LRRK1-208ENST00000532029 CALCRLQ16602 461 aa25.19■■□□□ 1.62
LRRK1-208ENST00000532029 SEPT1Q8WYJ6 367 aa25.19■■□□□ 1.62
LRRK1-208ENST00000532029 MTG1Q9BT17 334 aaPredicted RBP25.19■■□□□ 1.62
LRRK1-208ENST00000532029 KCNMB3Q9NPA1 279 aa25.19■■□□□ 1.62
LRRK1-208ENST00000532029 COL6A1P12109 1028 aa25.18■■□□□ 1.62
LRRK1-208ENST00000532029 PURAQ00577 322 aaKnown RBP25.18■■□□□ 1.62
LRRK1-208ENST00000532029 RESTQ13127 1097 aa25.18■■□□□ 1.62
LRRK1-208ENST00000532029 UBE2Q1Q7Z7E8 422 aa25.18■■□□□ 1.62
LRRK1-208ENST00000532029 SLFN12Q8IYM2 578 aa25.18■■□□□ 1.62
LRRK1-208ENST00000532029 ZSCAN16Q9H4T2 348 aaPredicted RBP25.18■■□□□ 1.62
LRRK1-208ENST00000532029 STARD7Q9NQZ5 370 aa25.18■■□□□ 1.62
LRRK1-208ENST00000532029 DOCK5Q9H7D0 1870 aa25.17■■□□□ 1.62
LRRK1-208ENST00000532029 ELP1O95163 1332 aa25.17■■□□□ 1.62
LRRK1-208ENST00000532029 HOXD8P13378 290 aaPredicted RBP25.17■■□□□ 1.62
LRRK1-208ENST00000532029 TOB1P50616 345 aaPredicted RBP25.17■■□□□ 1.62
LRRK1-208ENST00000532029 ACTR2P61160 394 aa25.17■■□□□ 1.62
LRRK1-208ENST00000532029 NBR1Q14596 966 aa25.17■■□□□ 1.62
LRRK1-208ENST00000532029 ZNF746Q6NUN9 644 aaPredicted RBP25.17■■□□□ 1.62
LRRK1-208ENST00000532029 GJA10Q969M2 543 aa25.17■■□□□ 1.62
LRRK1-208ENST00000532029 PSMD10O75832 226 aa25.16■■□□□ 1.62
LRRK1-208ENST00000532029 TCF7P36402 384 aaPredicted RBP25.16■■□□□ 1.62
LRRK1-208ENST00000532029 UTP14CQ5TAP6 766 aaKnown RBP25.16■■□□□ 1.62
LRRK1-208ENST00000532029 TELO2Q9Y4R8 837 aa25.16■■□□□ 1.62
LRRK1-208ENST00000532029 PCDHB6Q9Y5E3 794 aa25.16■■□□□ 1.62
LRRK1-208ENST00000532029 GSTTP1A0A1W2PQM5 241 aa25.15■■□□□ 1.62
LRRK1-208ENST00000532029 CCNE2O96020 404 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms