RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 GPR20Q99678 358 aa15.08■□□□□ 0
SF3B2-212ENST00000531589 ABHD14A-ACY1A0A1B0GW23 586 aa15.07■□□□□ 0
SF3B2-212ENST00000531589 hCG_1984214I3L0E3 225 aa15.07■□□□□ 0
SF3B2-212ENST00000531589 RCAN1P53805 252 aa15.07■□□□□ 0
SF3B2-212ENST00000531589 COL9A3Q14050 684 aaPredicted RBP15.07■□□□□ 0
SF3B2-212ENST00000531589 IKBKEQ14164 716 aa15.07■□□□□ 0
SF3B2-212ENST00000531589 SERINC5Q86VE9 423 aa15.07■□□□□ 0
SF3B2-212ENST00000531589 ZNF713Q8N859 430 aaPredicted RBP15.07■□□□□ 0
SF3B2-212ENST00000531589 SYMPKQ92797 1274 aaKnown RBP15.07■□□□□ 0
SF3B2-212ENST00000531589 GLT8D2Q9H1C3 349 aa15.07■□□□□ 0
SF3B2-212ENST00000531589 PCDHA6Q9UN73 950 aa15.07■□□□□ 0
SF3B2-212ENST00000531589 PCDHA8Q9Y5H6 950 aa15.07■□□□□ 0
SF3B2-212ENST00000531589 TANC1Q9C0D5 1861 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 CCDC196A0A1B0GTZ2 297 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 hCG_1642624A0A1W2PR95 340 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 RSPH10B2B2RC85 870 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 CAND2O75155 1236 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 FOSP01100 380 aaPredicted RBP15.06■□□□□ 0
SF3B2-212ENST00000531589 CA3P07451 260 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 RSPH10BP0C881 870 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 SMIM10L2AP0DMW4 78 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 SMIM10L2BP0DMW5 78 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 MYOGP15173 224 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 THPOP40225 353 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 NAPAP54920 295 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 ZNF200P98182 395 aaPredicted RBP15.06■□□□□ 0
SF3B2-212ENST00000531589 SEMA3FQ13275 785 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 MTMR1Q13613 665 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 TRIM71Q2Q1W2 868 aaKnown RBP15.06■□□□□ 0
SF3B2-212ENST00000531589 ZNF618Q5T7W0 954 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 PPP1R18Q6NYC8 613 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 SKAP1Q86WV1 359 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 RASEFQ8IZ41 740 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 ZBED2Q9BTP6 218 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 COL25A1Q9BXS0 654 aaPredicted RBP15.06■□□□□ 0
SF3B2-212ENST00000531589 TSPYL2Q9H2G4 693 aaPredicted RBP15.06■□□□□ 0
SF3B2-212ENST00000531589 RNPEPQ9H4A4 650 aa15.06■□□□□ 0
SF3B2-212ENST00000531589 MYH7BA7E2Y1 1941 aa15.05■□□□□ 0
SF3B2-212ENST00000531589 KLF18A0A0U1RQI7 1052 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 GOLGA8AA7E2F4 631 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 GOLGA8BA8MQT2 603 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 TLL1O43897 1013 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 NBNO60934 754 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 LGR5O75473 907 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 HOXC8P31273 242 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 WDR5P61964 334 aaKnown RBP15.05■□□□□ -0
SF3B2-212ENST00000531589 SP4Q02446 784 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 GPNMBQ14956 572 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 UBE2SQ16763 222 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 ADCK5Q3MIX3 580 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 UTP14CQ5TAP6 766 aaKnown RBP15.05■□□□□ -0
SF3B2-212ENST00000531589 PPM1EQ8WY54 764 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 SEPT1Q8WYJ6 367 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 BCAS3Q9H6U6 928 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 BRPF3Q9ULD4 1205 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 UBIAD1Q9Y5Z9 338 aa15.05■□□□□ -0
SF3B2-212ENST00000531589 V9GY48 417 aaPredicted RBP15.05■□□□□ -0
SF3B2-212ENST00000531589 CNTNAP5Q8WYK1 1306 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 NRCAMQ92823 1304 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 GTPBP6O43824 516 aaPredicted RBP15.04■□□□□ -0
SF3B2-212ENST00000531589 REC8O95072 547 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 TCF7P36402 384 aaPredicted RBP15.04■□□□□ -0
SF3B2-212ENST00000531589 ADGRE1Q14246 886 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 WWC2Q6AWC2 1192 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 TNPO1Q92973 898 aaKnown RBP15.04■□□□□ -0
SF3B2-212ENST00000531589 TCEANC2Q96MN5 208 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 RIC8AQ9NPQ8 531 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 JADE2Q9NQC1 790 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 SETD4Q9NVD3 440 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 NAP1L2Q9ULW6 460 aaPredicted RBP15.04■□□□□ -0
SF3B2-212ENST00000531589 SCN5AQ14524 2016 aa15.04■□□□□ -0
SF3B2-212ENST00000531589 TREHO43280 583 aa15.03■□□□□ -0
SF3B2-212ENST00000531589 KCNA2P16389 499 aa15.03■□□□□ -0
SF3B2-212ENST00000531589 ITGB5P18084 799 aa15.03■□□□□ -0
SF3B2-212ENST00000531589 HIC1Q14526 733 aa15.03■□□□□ -0
SF3B2-212ENST00000531589 TRAF7Q6Q0C0 670 aa15.03■□□□□ -0
SF3B2-212ENST00000531589 BLOC1S2Q6QNY1 142 aa15.03■□□□□ -0
SF3B2-212ENST00000531589 USP38Q8NB14 1042 aa15.03■□□□□ -0
SF3B2-212ENST00000531589 ATXN2LQ8WWM7 1075 aaKnown RBP15.03■□□□□ -0
SF3B2-212ENST00000531589 WNT8BQ93098 351 aa15.03■□□□□ -0
SF3B2-212ENST00000531589 ERAP1Q9NZ08 941 aa15.03■□□□□ -0
SF3B2-212ENST00000531589 CDH23Q9H251 3354 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 SMCO2A6NFE2 343 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 ATP9AO75110 1047 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 GJB5O95377 273 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 RPLP2P05387 115 aaKnown RBP15.02■□□□□ -0
SF3B2-212ENST00000531589 POU3F3P20264 500 aaPredicted RBP15.02■□□□□ -0
SF3B2-212ENST00000531589 PSMA5P28066 241 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 HSPA4P34932 840 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 METAP2P50579 478 aaKnown RBP eCLIP15.02■□□□□ -01e-7■■□□□ 13.6
SF3B2-212ENST00000531589 ADCY7P51828 1080 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 ARHGAP4P98171 946 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 TAP1Q03518 808 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 FUT2Q10981 343 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 AP3B2Q13367 1082 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 CCDC85BQ15834 202 aaPredicted RBP15.02■□□□□ -0
SF3B2-212ENST00000531589 TJAP1Q5JTD0 557 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 MCTP2Q6DN12 878 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 TAF2Q6P1X5 1199 aa15.02■□□□□ -0
SF3B2-212ENST00000531589 TRIM50Q86XT4 487 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms