RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 NLRX1Q86UT6 975 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 WNT8BQ93098 351 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 GPRASP2Q96D09 838 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 CDHR1Q96JP9 859 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 RAD9AQ99638 391 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 MYL10Q9BUA6 226 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 PRDM6Q9NQX0 595 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 LMCD1Q9NZU5 365 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 SLC12A7Q9Y666 1083 aa15.35■□□□□ 0.05
AMBRA1-210ENST00000531542 SCN5AQ14524 2016 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 BAZ2BQ9UIF8 2168 aaKnown RBP15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 RSPH10B2B2RC85 870 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 MAFGO15525 162 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 GTPBP6O43824 516 aaPredicted RBP15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 LGR5O75473 907 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 RSPH10BP0C881 870 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 SMIM10L2AP0DMW4 78 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 SMIM10L2BP0DMW5 78 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 GNAT1P11488 350 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 ADAM17P78536 824 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 ZNF200P98182 395 aaPredicted RBP15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 TSGA10IPQ3SY00 556 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 USP17L6PQ6QN14 398 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 NFXL1Q6ZNB6 911 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 CYFIP1Q7L576 1253 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 FANCBQ8NB91 859 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 PPM1EQ8WY54 764 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 ATP6V0A1Q93050 837 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 RNPEPQ9H4A4 650 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 BCAS3Q9H6U6 928 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 PSTPIP2Q9H939 334 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 TET1Q8NFU7 2136 aa15.34■□□□□ 0.05
AMBRA1-210ENST00000531542 PLEKHA8P1O95397 391 aa15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 CCDC85BQ15834 202 aaPredicted RBP15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 AAK1Q2M2I8 961 aa15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 PLEKHG4Q58EX7 1191 aa15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 TMTC3Q6ZXV5 915 aa15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 RPAINQ86UA6 219 aa15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 ZFP91Q96JP5 570 aaPredicted RBP15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 RTEL1Q9NZ71 1219 aa15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 ZNF215Q9UL58 517 aaPredicted RBP15.33■□□□□ 0.04
AMBRA1-210ENST00000531542 GBF1Q92538 1859 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 EPOPA6NHQ4 379 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 ARHGEF15O94989 841 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 THPOP40225 353 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 DEFB103AP81534 67 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 COL9A3Q14050 684 aaPredicted RBP15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 TCTN1Q2MV58 587 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 ZBED2Q9BTP6 218 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 ANO2Q9NQ90 1003 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 NRCAMQ92823 1304 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 MUC3AQ02505 3323 aa15.32■□□□□ 0.04
AMBRA1-210ENST00000531542 NCOR1O75376 2440 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 TNFRSF10AO00220 468 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 TREHO43280 583 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 SORBS3O60504 671 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 LPXNO60711 386 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 KCNA2P16389 499 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 ITGB5P18084 799 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 ERVK-21P61565 698 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 EXOSC10Q01780 885 aaKnown RBP15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 FAM26DQ5JW98 314 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 ARNTL2Q8WYA1 636 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 RBM28Q9NW13 759 aaKnown RBP15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 COG5Q9UP83 839 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 INSL6Q9Y581 213 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 UBIAD1Q9Y5Z9 338 aa15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 TRIP12Q14669 1992 aaPredicted RBP15.31■□□□□ 0.04
AMBRA1-210ENST00000531542 LCHNA4D1U4 455 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 RFXAPO00287 272 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 RCAN1P53805 252 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 HTRA4P83105 476 aaPredicted RBP15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 GRB10Q13322 594 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 APOA5Q6Q788 366 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 SYNE3Q6ZMZ3 975 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 DHX32Q7L7V1 743 aaKnown RBP15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 DBF4BQ8NFT6 615 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 SEPT1Q8WYJ6 367 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 NEK1Q96PY6 1258 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 BDP1A6H8Y1 2624 aa15.3■□□□□ 0.04
AMBRA1-210ENST00000531542 SPDYE3A6NKU9 549 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 hCG_1984214I3L0E3 225 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 ATP9AO75110 1047 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 AMHP03971 560 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 RPLP2P05387 115 aaKnown RBP15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 BMP1P13497 986 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 RXRAP19793 462 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 TCF7P36402 384 aaPredicted RBP15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 FUT2Q10981 343 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 PPP1R18Q6NYC8 613 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 TAF2Q6P1X5 1199 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 CMTR1Q8N1G2 835 aaKnown RBP15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 ZNF713Q8N859 430 aaPredicted RBP15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 SP7Q8TDD2 431 aaPredicted RBP15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 ADAMTS19Q8TE59 1207 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 SEPT8Q92599 483 aa15.29■□□□□ 0.04
AMBRA1-210ENST00000531542 APBB2Q92870 758 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms