RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 WDR5P61964 334 aaKnown RBP25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 SEMA3FQ13275 785 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 IKBKEQ14164 716 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 HIC1Q14526 733 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 SERINC5Q86VE9 423 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 GIMAP8Q8ND71 665 aaPredicted RBP25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 WNT8BQ93098 351 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 GPR20Q99678 358 aa25.61■■□□□ 1.69
TRAPPC4-210ENST00000531290 EFCAB14O75071 495 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 SMIM10L2AP0DMW4 78 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 SMIM10L2BP0DMW5 78 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 GNAT1P11488 350 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 HEATR3Q7Z4Q2 680 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 CDHR1Q96JP9 859 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 CERS4Q9HA82 394 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 PRDM6Q9NQX0 595 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 ZNF215Q9UL58 517 aaPredicted RBP25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 CHD9Q3L8U1 2897 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 CUL9Q8IWT3 2517 aa25.6■■□□□ 1.69
TRAPPC4-210ENST00000531290 SPDYE3A6NKU9 549 aa25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 RSPH10B2B2RC85 870 aa25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 CENPBP07199 599 aaPredicted RBP25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 RSPH10BP0C881 870 aa25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 SP4Q02446 784 aa25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 TJAP1Q5JTD0 557 aa25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 UTP14CQ5TAP6 766 aaKnown RBP25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 DHX32Q7L7V1 743 aaKnown RBP25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 TSPYL2Q9H2G4 693 aaPredicted RBP25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 RNPEPQ9H4A4 650 aa25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 RBM28Q9NW13 759 aaKnown RBP25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 EMSYQ7Z589 1322 aa25.59■■□□□ 1.69
TRAPPC4-210ENST00000531290 CDC45O75419 566 aa25.58■■□□□ 1.69
TRAPPC4-210ENST00000531290 TAP1Q03518 808 aa25.58■■□□□ 1.69
TRAPPC4-210ENST00000531290 TRAF7Q6Q0C0 670 aa25.58■■□□□ 1.69
TRAPPC4-210ENST00000531290 MICALL1Q8N3F8 863 aa25.58■■□□□ 1.69
TRAPPC4-210ENST00000531290 ATXN2LQ8WWM7 1075 aaKnown RBP25.58■■□□□ 1.69
TRAPPC4-210ENST00000531290 ARNTL2Q8WYA1 636 aa25.58■■□□□ 1.69
TRAPPC4-210ENST00000531290 GPRASP2Q96D09 838 aa25.58■■□□□ 1.69
TRAPPC4-210ENST00000531290 MYH6P13533 1939 aa25.58■■□□□ 1.69
TRAPPC4-210ENST00000531290 GTPBP6O43824 516 aaPredicted RBP25.57■■□□□ 1.68
TRAPPC4-210ENST00000531290 LGR5O75473 907 aa25.57■■□□□ 1.68
TRAPPC4-210ENST00000531290 KRT32Q14532 448 aa25.57■■□□□ 1.68
TRAPPC4-210ENST00000531290 UBE2SQ16763 222 aa25.57■■□□□ 1.68
TRAPPC4-210ENST00000531290 APOA5Q6Q788 366 aa25.57■■□□□ 1.68
TRAPPC4-210ENST00000531290 SETD4Q9NVD3 440 aa25.57■■□□□ 1.68
TRAPPC4-210ENST00000531290 THEGQ9P2T0 379 aa25.57■■□□□ 1.68
TRAPPC4-210ENST00000531290 BAZ2BQ9UIF8 2168 aaKnown RBP25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 RFXAPO00287 272 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 TREHO43280 583 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 ZBTB43O43298 467 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 HOXC8P31273 242 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 DEFB103AP81534 67 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 EXOSC10Q01780 885 aaKnown RBP25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 MBTPS1Q14703 1052 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 TSGA10IPQ3SY00 556 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 CCDC136Q96JN2 1154 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 EHMT1Q9H9B1 1298 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 PCDHA6Q9UN73 950 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 PCDHA8Q9Y5H6 950 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 KIAA1217Q5T5P2 1943 aa25.56■■□□□ 1.68
TRAPPC4-210ENST00000531290 MTMR1Q13613 665 aa25.55■■□□□ 1.68
TRAPPC4-210ENST00000531290 RTN1Q16799 776 aa25.55■■□□□ 1.68
TRAPPC4-210ENST00000531290 TCTN1Q2MV58 587 aa25.55■■□□□ 1.68
TRAPPC4-210ENST00000531290 TMCO2Q7Z6W1 182 aaPredicted RBP25.55■■□□□ 1.68
TRAPPC4-210ENST00000531290 TRIM50Q86XT4 487 aa25.55■■□□□ 1.68
TRAPPC4-210ENST00000531290 RASEFQ8IZ41 740 aa25.55■■□□□ 1.68
TRAPPC4-210ENST00000531290 TCEANC2Q96MN5 208 aa25.55■■□□□ 1.68
TRAPPC4-210ENST00000531290 VCANP13611 3396 aa25.55■■□□□ 1.68
TRAPPC4-210ENST00000531290 ATP9AO75110 1047 aa25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 CAND2O75155 1236 aa25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 HMGB1P09429 215 aaKnown RBP25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 ITGB5P18084 799 aa25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 DBF4BQ8NFT6 615 aa25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 SEPT1Q8WYJ6 367 aa25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 RAD9AQ99638 391 aa25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 BRPF3Q9ULD4 1205 aa25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 TELO2Q9Y4R8 837 aa25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 UBIAD1Q9Y5Z9 338 aa25.54■■□□□ 1.68
TRAPPC4-210ENST00000531290 MAFGO15525 162 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 ARHGEF15O94989 841 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 GJB5O95377 273 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 KCNA2P16389 499 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 POU3F3P20264 500 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 TCF7P36402 384 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 NAPAP54920 295 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 MRPS5P82675 430 aaKnown RBP25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 ARHGAP4P98171 946 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 FGD1P98174 961 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 ADCK5Q3MIX3 580 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 ASB2Q96Q27 587 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 JADE2Q9NQC1 790 aa25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 V9GY48 417 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC4-210ENST00000531290 SKIV2LQ15477 1246 aaKnown RBP25.52■■□□□ 1.68
TRAPPC4-210ENST00000531290 WWC2Q6AWC2 1192 aa25.52■■□□□ 1.68
TRAPPC4-210ENST00000531290 SEPT8Q92599 483 aa25.52■■□□□ 1.68
TRAPPC4-210ENST00000531290 PKD2L1Q9P0L9 805 aa25.52■■□□□ 1.68
TRAPPC4-210ENST00000531290 NAP1L2Q9ULW6 460 aaPredicted RBP25.52■■□□□ 1.68
TRAPPC4-210ENST00000531290 MTCH2Q9Y6C9 303 aa25.52■■□□□ 1.68
TRAPPC4-210ENST00000531290 NRCAMQ92823 1304 aa25.52■■□□□ 1.68
TRAPPC4-210ENST00000531290 SCN5AQ14524 2016 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms