RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 NDUFA8P51970 172 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 C10orf76Q5T2E6 689 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 SMYD4Q8IYR2 804 aaPredicted RBP15.81■□□□□ 0.12
LRRK1-207ENST00000531270 CYTH2Q99418 400 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 HAUS4Q9H6D7 363 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 MED7O43513 233 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 SEC31AO94979 1220 aaKnown RBP15.81■□□□□ 0.12
LRRK1-207ENST00000531270 HSPD1P10809 573 aaKnown RBP15.81■□□□□ 0.12
LRRK1-207ENST00000531270 PTK2BQ14289 1009 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 GINM1Q9NU53 330 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 TPCN1Q9ULQ1 816 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 PACSIN2Q9UNF0 486 aaPredicted RBP15.81■□□□□ 0.12
LRRK1-207ENST00000531270 KDM5BQ9UGL1 1544 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 FTCDO95954 541 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 MYL3P08590 195 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 NUDCD3Q8IVD9 361 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 GIPC2Q8TF65 315 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 TUBGCP2Q9BSJ2 902 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 HSPA8P11142 646 aaKnown RBP15.81■□□□□ 0.12
LRRK1-207ENST00000531270 CHRNDQ07001 517 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 MYO1EQ12965 1108 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 BBS9Q3SYG4 887 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 FAM133AQ8N9E0 248 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 FTOQ9C0B1 505 aaKnown RBP eCLIP15.81■□□□□ 0.12
LRRK1-207ENST00000531270 COG4Q9H9E3 785 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 SPATA1Q5VX52 437 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 KLC3Q6P597 504 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 THOC1Q96FV9 657 aaKnown RBP15.81■□□□□ 0.12
LRRK1-207ENST00000531270 EDEM3Q9BZQ6 932 aa15.81■□□□□ 0.12
LRRK1-207ENST00000531270 NEMP1O14524 444 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 ANP32DO95626 131 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 DAB2P98082 770 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 PTH1RQ03431 593 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 TRIM11Q96F44 468 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 A0A0D9SFI3 127 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 SLC35F6Q8N357 371 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 ZNF496Q96IT1 587 aaPredicted RBP15.8■□□□□ 0.12
LRRK1-207ENST00000531270 AMNQ9BXJ7 453 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 SLC7A5P2Q9GIP4 190 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 POLE2P56282 527 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 FLOT2Q14254 428 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 EXOC8Q8IYI6 725 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 SLC4A7Q9Y6M7 1214 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 AP1ARQ63HQ0 302 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 FAM49AQ9H0Q0 323 aaPredicted RBP15.8■□□□□ 0.12
LRRK1-207ENST00000531270 GOLGA8IPA6NC78 632 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 GOLGA8JA6NMD2 632 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 MAP3K7O43318 606 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 DDAH1O94760 285 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 SPATS2Q86XZ4 545 aaKnown RBP15.8■□□□□ 0.12
LRRK1-207ENST00000531270 LARP4BQ92615 738 aaKnown RBP15.8■□□□□ 0.12
LRRK1-207ENST00000531270 LMBRD1Q9NUN5 540 aa15.8■□□□□ 0.12
LRRK1-207ENST00000531270 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 F5H423 210 aaPredicted RBP15.79■□□□□ 0.12
LRRK1-207ENST00000531270 PPEF1O14829 653 aaPredicted RBP15.79■□□□□ 0.12
LRRK1-207ENST00000531270 E2F6O75461 281 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 HSPA6P17066 643 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 ATP5JP18859 108 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 LONP1P36776 959 aaKnown RBP15.79■□□□□ 0.12
LRRK1-207ENST00000531270 WDR48Q8TAF3 677 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 TRAIPQ9BWF2 469 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 SARS2Q9NP81 518 aaKnown RBP15.79■□□□□ 0.12
LRRK1-207ENST00000531270 IFNA8P32881 189 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 MXD4Q14582 209 aaPredicted RBP15.79■□□□□ 0.12
LRRK1-207ENST00000531270 ZNF274Q96GC6 653 aaPredicted RBP15.79■□□□□ 0.12
LRRK1-207ENST00000531270 ZBTB18Q99592 522 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 DBNDD1Q9H9R9 158 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 ZC4H2Q9NQZ6 224 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 VCPP55072 806 aaKnown RBP15.79■□□□□ 0.12
LRRK1-207ENST00000531270 SNAP25P60880 206 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 DRP2Q13474 957 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 KLHL29Q96CT2 875 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 NLRP4Q96MN2 994 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 PCDHA7Q9UN72 937 aa15.79■□□□□ 0.12
LRRK1-207ENST00000531270 RPAINQ86UA6 219 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 TEKT4Q8WW24 435 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 DACH2Q96NX9 599 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 NKX1-1Q15270 411 aaPredicted RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 CCDC85BQ15834 202 aaPredicted RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 LRRC24Q50LG9 513 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 OR6B3Q8NGW1 331 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 JPH2Q9BR39 696 aaPredicted RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 TMEM63CQ9P1W3 806 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 ZNF215Q9UL58 517 aaPredicted RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 SCINQ9Y6U3 715 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 A0A1W2PP64 1363 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 RBL2Q08999 1139 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 SKIV2LQ15477 1246 aaKnown RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 MIGA2Q7L4E1 593 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 ADD3Q9UEY8 706 aaKnown RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 SNX2O60749 519 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 HSPA4LO95757 839 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 ZBED1O96006 694 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 LBRQ14739 615 aaKnown RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 GRAMD1BQ3KR37 738 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 FASTKD5Q7L8L6 764 aaKnown RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 NRBF2Q96F24 287 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 TESK2Q96S53 571 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms