RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 PPP1R13LQ8WUF5 828 aa19.25■□□□□ 0.67
SF3B2-209ENST00000530322 HAS3O00219 553 aa19.24■□□□□ 0.67
SF3B2-209ENST00000530322 DTNBO60941 627 aa19.24■□□□□ 0.67
SF3B2-209ENST00000530322 TIMP1P01033 207 aa19.24■□□□□ 0.67
SF3B2-209ENST00000530322 CYP3A4P08684 503 aa19.24■□□□□ 0.67
SF3B2-209ENST00000530322 PTPN11Q06124 597 aaPredicted RBP19.24■□□□□ 0.67
SF3B2-209ENST00000530322 CEP55Q53EZ4 464 aa19.24■□□□□ 0.67
SF3B2-209ENST00000530322 GPR20Q99678 358 aa19.24■□□□□ 0.67
SF3B2-209ENST00000530322 C16orf70Q9BSU1 422 aa19.24■□□□□ 0.67
SF3B2-209ENST00000530322 KCNH7Q9NS40 1196 aa19.24■□□□□ 0.67
SF3B2-209ENST00000530322 TRMT13Q9NUP7 481 aaKnown RBP19.24■□□□□ 0.67
SF3B2-209ENST00000530322 TELO2Q9Y4R8 837 aa19.24■□□□□ 0.67
SF3B2-209ENST00000530322 MEIS1O00470 390 aa19.23■□□□□ 0.67
SF3B2-209ENST00000530322 NOP56O00567 594 aaKnown RBP19.23■□□□□ 0.67
SF3B2-209ENST00000530322 PSEN2P49810 448 aa19.23■□□□□ 0.67
SF3B2-209ENST00000530322 NPY5RQ15761 445 aa19.23■□□□□ 0.67
SF3B2-209ENST00000530322 FAM47CQ5HY64 1035 aa19.23■□□□□ 0.67
SF3B2-209ENST00000530322 NIPA1Q7RTP0 329 aa19.23■□□□□ 0.67
SF3B2-209ENST00000530322 SESTD1Q86VW0 696 aa19.23■□□□□ 0.67
SF3B2-209ENST00000530322 KATNAL1Q9BW62 490 aa19.23■□□□□ 0.67
SF3B2-209ENST00000530322 PCDHA4Q9UN74 947 aa19.23■□□□□ 0.67
SF3B2-209ENST00000530322 GTF3C3Q9Y5Q9 886 aa19.23■□□□□ 0.67
SF3B2-209ENST00000530322 M0R2N6 131 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 SUPT20HL2P0C7V6 817 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 ARP10275 920 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 CHMP4BP1P59074 171 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 ST3GAL1Q11201 340 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 MFSD10Q14728 455 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 KIAA0753Q2KHM9 967 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 TDHQ8IZJ6 230 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 DAGLBQ8NCG7 672 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 PKD2L1Q9P0L9 805 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 ORC3Q9UBD5 711 aaPredicted RBP19.22■□□□□ 0.67
SF3B2-209ENST00000530322 LIMCH1Q9UPQ0 1083 aa19.22■□□□□ 0.67
SF3B2-209ENST00000530322 LAMA3Q16787 3333 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 IGLV3-22A0A075B6J6 115 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 FAM86B1E9PN63 330 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 LGALS2P05162 132 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 FAM86B2P0C5J1 330 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 FDPSP14324 419 aaKnown RBP19.21■□□□□ 0.67
SF3B2-209ENST00000530322 ZNF76P36508 570 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 SP4Q02446 784 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 GALNT17Q6IS24 598 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 MFSD5Q6N075 450 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 BLIDQ8IZY5 108 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 NSUN7Q8NE18 718 aaKnown RBP19.21■□□□□ 0.67
SF3B2-209ENST00000530322 ALG1Q9BT22 464 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 PHF20Q9BVI0 1012 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 NOC4LQ9BVI4 516 aaKnown RBP19.21■□□□□ 0.67
SF3B2-209ENST00000530322 PPP1R12CQ9BZL4 782 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 HIPK3Q9H422 1215 aa19.21■□□□□ 0.67
SF3B2-209ENST00000530322 UPF2Q9HAU5 1272 aaKnown RBP19.21■□□□□ 0.67
SF3B2-209ENST00000530322 TRIP12Q14669 1992 aaPredicted RBP19.21■□□□□ 0.67
SF3B2-209ENST00000530322 H3BRB1 525 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 EDIL3O43854 480 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 CYP2C9P11712 490 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 CIITAP33076 1130 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 FPGSQ05932 587 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 GDF6Q6KF10 455 aaPredicted RBP19.2■□□□□ 0.66
SF3B2-209ENST00000530322 C7orf31Q8N865 590 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 TUT1Q9H6E5 874 aaKnown RBP19.2■□□□□ 0.66
SF3B2-209ENST00000530322 AGO4Q9HCK5 861 aaKnown RBP19.2■□□□□ 0.66
SF3B2-209ENST00000530322 GJB4Q9NTQ9 266 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 HDAC6Q9UBN7 1215 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 GTF2IRD1Q9UHL9 959 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 KCNJ14Q9UNX9 436 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 NFASCO94856 1347 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 UMODL1Q5DID0 1318 aa19.2■□□□□ 0.66
SF3B2-209ENST00000530322 LAMA2P24043 3122 aaKnown RBP19.2■□□□□ 0.66
SF3B2-209ENST00000530322 GSTTP1A0A1W2PQM5 241 aa19.19■□□□□ 0.66
SF3B2-209ENST00000530322 CYP2C18P33260 490 aa19.19■□□□□ 0.66
SF3B2-209ENST00000530322 FXR1P51114 621 aaKnown RBP eCLIP19.19■□□□□ 0.661e-6■■■■□ 20.6
SF3B2-209ENST00000530322 EPHB4P54760 987 aa19.19■□□□□ 0.66
SF3B2-209ENST00000530322 ITGB3BPQ13352 177 aaPredicted RBP19.19■□□□□ 0.66
SF3B2-209ENST00000530322 RABEP1Q15276 862 aa19.19■□□□□ 0.66
SF3B2-209ENST00000530322 PLA2G4DQ86XP0 818 aa19.19■□□□□ 0.66
SF3B2-209ENST00000530322 SEPT1Q8WYJ6 367 aa19.19■□□□□ 0.66
SF3B2-209ENST00000530322 WASF1Q92558 559 aa19.19■□□□□ 0.66
SF3B2-209ENST00000530322 CTAGE1Q96RT6 745 aa19.19■□□□□ 0.66
SF3B2-209ENST00000530322 JAK2O60674 1132 aa19.18■□□□□ 0.66
SF3B2-209ENST00000530322 XBP1P17861 261 aa19.18■□□□□ 0.66
SF3B2-209ENST00000530322 TCF7P36402 384 aaPredicted RBP19.18■□□□□ 0.66
SF3B2-209ENST00000530322 PTGISQ16647 500 aa19.18■□□□□ 0.66
SF3B2-209ENST00000530322 TRIM50Q86XT4 487 aa19.18■□□□□ 0.66
SF3B2-209ENST00000530322 TMEM199Q8N511 208 aa19.18■□□□□ 0.66
SF3B2-209ENST00000530322 ZSCAN31Q96LW9 406 aaPredicted RBP19.18■□□□□ 0.66
SF3B2-209ENST00000530322 TBC1D32Q96NH3 1257 aa19.18■□□□□ 0.66
SF3B2-209ENST00000530322 SDF4Q9BRK5 362 aa19.18■□□□□ 0.66
SF3B2-209ENST00000530322 WNT8AQ9H1J5 351 aa19.18■□□□□ 0.66
SF3B2-209ENST00000530322 JPH1Q9HDC5 661 aaPredicted RBP19.18■□□□□ 0.66
SF3B2-209ENST00000530322 SLC9A2Q9UBY0 812 aa19.18■□□□□ 0.66
SF3B2-209ENST00000530322 CSF2RAP15509 400 aa19.17■□□□□ 0.66
SF3B2-209ENST00000530322 USP11P51784 963 aa19.17■□□□□ 0.66
SF3B2-209ENST00000530322 SETQ01105 290 aaPredicted RBP19.17■□□□□ 0.66
SF3B2-209ENST00000530322 HIC1Q14526 733 aa19.17■□□□□ 0.66
SF3B2-209ENST00000530322 SHHQ15465 462 aa19.17■□□□□ 0.66
SF3B2-209ENST00000530322 UTP14CQ5TAP6 766 aaKnown RBP19.17■□□□□ 0.66
SF3B2-209ENST00000530322 TBCKQ8TEA7 893 aa19.17■□□□□ 0.66
SF3B2-209ENST00000530322 LENG9Q96B70 501 aa19.17■□□□□ 0.66
SF3B2-209ENST00000530322 NOD1Q9Y239 953 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms