RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 PNKPQ96T60 521 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 IL17RBQ9NRM6 502 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 GCOM1H8Y6P7 765 aaPredicted RBP13.54□□□□□ -0.24
SCN3B-206ENST00000530277 POLR2MP0CAP2 368 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 TNNI1P19237 187 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 FAM186BQ8IYM0 893 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 TUBBP07437 444 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 ZNF211Q13398 564 aaPredicted RBP13.54□□□□□ -0.24
SCN3B-206ENST00000530277 FAM83BQ5T0W9 1011 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 BANK1Q8NDB2 785 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 ZNF668Q96K58 619 aaPredicted RBP13.54□□□□□ -0.24
SCN3B-206ENST00000530277 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
SCN3B-206ENST00000530277 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 LAD1O00515 517 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 KCNH2Q12809 1159 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 SNX1Q13596 522 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 HOOK2Q96ED9 719 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 C3P01024 1663 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 ZBTB5O15062 677 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 SSTR3P32745 418 aaPredicted RBP13.53□□□□□ -0.24
SCN3B-206ENST00000530277 GGCXP38435 758 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 PDCLQ13371 301 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 UAP1Q16222 522 aaPredicted RBP13.53□□□□□ -0.24
SCN3B-206ENST00000530277 ALKBH5Q6P6C2 394 aaKnown RBP13.53□□□□□ -0.24
SCN3B-206ENST00000530277 UNC13DQ70J99 1090 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 RETREG2Q8NC44 543 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 CCDC26Q8TAB7 109 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 MTMR4Q9NYA4 1195 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 MAD2L2Q9UI95 211 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 UTP11Q9Y3A2 253 aaKnown RBP13.53□□□□□ -0.24
SCN3B-206ENST00000530277 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 CALCOCO2Q13137 446 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 TUBB2AQ13885 445 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 ANKRD42Q8N9B4 389 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 LRRC1Q9BTT6 524 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 TUBB2BQ9BVA1 445 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 AMFRQ9UKV5 643 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 ATP8A1Q9Y2Q0 1164 aa13.53□□□□□ -0.24
SCN3B-206ENST00000530277 IFNB1P01574 187 aa13.52□□□□□ -0.24
SCN3B-206ENST00000530277 MYZAPP0CAP1 466 aa13.52□□□□□ -0.24
SCN3B-206ENST00000530277 PDHBP11177 359 aa13.52□□□□□ -0.24
SCN3B-206ENST00000530277 TRIP13Q15645 432 aaPredicted RBP13.52□□□□□ -0.24
SCN3B-206ENST00000530277 TMED8Q6PL24 325 aaPredicted RBP13.52□□□□□ -0.24
SCN3B-206ENST00000530277 TTC16Q8NEE8 873 aa13.52□□□□□ -0.24
SCN3B-206ENST00000530277 PI4KBQ9UBF8 816 aa13.52□□□□□ -0.24
SCN3B-206ENST00000530277 JRKLQ9Y4A0 524 aa13.52□□□□□ -0.24
SCN3B-206ENST00000530277 TTC31Q49AM3 519 aaPredicted RBP13.52□□□□□ -0.25
SCN3B-206ENST00000530277 SH2D3CQ8N5H7 860 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 GLIS3Q8NEA6 775 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 DDX47Q9H0S4 455 aaKnown RBP13.52□□□□□ -0.25
SCN3B-206ENST00000530277 STK17AQ9UEE5 414 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 SLIT1O75093 1534 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 CYTH3O43739 400 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 NMT1P30419 496 aaKnown RBP13.52□□□□□ -0.25
SCN3B-206ENST00000530277 PDE6BP35913 854 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 NLGN1Q8N2Q7 840 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 NUDT12Q9BQG2 462 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 CAPS2Q9BXY5 557 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 CUEDC2Q9H467 287 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 PDE4DIPQ5VU43 2346 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 ANKRD26Q9UPS8 1709 aa13.52□□□□□ -0.25
SCN3B-206ENST00000530277 ADAMTS3O15072 1205 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 PLTPP55058 493 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 SEL1L2Q5TEA6 688 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 TRIM65Q6PJ69 517 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 HOOK3Q86VS8 718 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 RAD54LQ92698 747 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 LIMA1Q9UHB6 759 aaKnown RBP13.51□□□□□ -0.25
SCN3B-206ENST00000530277 AFPP02771 609 aaKnown RBP13.51□□□□□ -0.25
SCN3B-206ENST00000530277 CD19P15391 556 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 PLA2G4AP47712 749 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 PPFIA1Q13136 1202 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 E2F4Q16254 413 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 CCDC121Q6ZUS5 278 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 COG1Q8WTW3 980 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 POLLQ9UGP5 575 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 JCADQ9P266 1359 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 RIC1Q4ADV7 1423 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 GBP2P32456 591 aaPredicted RBP13.51□□□□□ -0.25
SCN3B-206ENST00000530277 TUBB4BP68371 445 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 KRT27Q7Z3Y8 459 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 SLFN12Q8IYM2 578 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 PPP1R16BQ96T49 567 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 ANKFY1Q9P2R3 1169 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 SERPINA10Q9UK55 444 aa13.51□□□□□ -0.25
SCN3B-206ENST00000530277 INPP5BP32019 993 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 GRM1Q13255 1194 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 EZH2Q15910 746 aaKnown RBP13.5□□□□□ -0.25
SCN3B-206ENST00000530277 KAZNQ674X7 775 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 MICALCLQ6ZW33 695 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 UBE2TQ9NPD8 197 aaPredicted RBP13.5□□□□□ -0.25
SCN3B-206ENST00000530277 RASAL2Q9UJF2 1139 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 AFF2P51816 1311 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 COL5A2P05997 1499 aaPredicted RBP13.5□□□□□ -0.25
SCN3B-206ENST00000530277 ARHGAP23Q9P227 1491 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 RNF225M0QZC1 329 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms