RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 ENC1O14682 589 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 GIPC1O14908 333 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 TREHO43280 583 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 HMMRO75330 724 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 SURF6O75683 361 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 EOMESO95936 686 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 GLI1P08151 1106 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 LMNB1P20700 586 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 BMP6P22004 513 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 IARSP41252 1262 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 HDAC1Q13547 482 aaPredicted RBP10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 METTL24Q5JXM2 366 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 C15orf52Q6ZUT6 534 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 C12orf40Q86WS4 652 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 SUPT20HQ8NEM7 779 aa10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 ZNF646O15015 1829 aaPredicted RBP10.77□□□□□ -0.69
CCDC90B-217ENST00000530253 DICER1Q9UPY3 1922 aaKnown RBP10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 FAM155AB1AL88 458 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 TFCP2Q12800 502 aa10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 UBE4AQ14139 1066 aa10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 C22orf34Q6ZV56 151 aa10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 CYFIP1Q7L576 1253 aa10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 ZSCAN18Q8TBC5 510 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 GRIN3AQ8TCU5 1115 aa10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 KIRREL1Q96J84 757 aa10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 TMX4Q9H1E5 349 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 VPS33BQ9H267 617 aa10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
CCDC90B-217ENST00000530253 PPIP5K2O43314 1243 aa10.75□□□□□ -0.69
CCDC90B-217ENST00000530253 G3BP1Q13283 466 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC90B-217ENST00000530253 PUM3Q15397 648 aaKnown RBP10.75□□□□□ -0.69
CCDC90B-217ENST00000530253 ATP2B3Q16720 1220 aa10.75□□□□□ -0.69
CCDC90B-217ENST00000530253 ZNF746Q6NUN9 644 aaPredicted RBP10.75□□□□□ -0.69
CCDC90B-217ENST00000530253 MPZL3Q6UWV2 235 aa10.75□□□□□ -0.69
CCDC90B-217ENST00000530253 NPAS4Q8IUM7 802 aa10.75□□□□□ -0.69
CCDC90B-217ENST00000530253 GPR108Q9NPR9 543 aa10.75□□□□□ -0.69
CCDC90B-217ENST00000530253 IGHDP01880 384 aa10.74□□□□□ -0.69
CCDC90B-217ENST00000530253 MAPK1P28482 360 aa10.74□□□□□ -0.69
CCDC90B-217ENST00000530253 MFSD4AQ8N468 514 aa10.74□□□□□ -0.69
CCDC90B-217ENST00000530253 RETREG2Q8NC44 543 aa10.74□□□□□ -0.69
CCDC90B-217ENST00000530253 EYA3Q99504 573 aa10.74□□□□□ -0.69
CCDC90B-217ENST00000530253 TPX2Q9ULW0 747 aaKnown RBP10.74□□□□□ -0.69
CCDC90B-217ENST00000530253 COL1A1P02452 1464 aaPredicted RBP10.74□□□□□ -0.69
CCDC90B-217ENST00000530253 YDJCA8MPS7 323 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 FZD9O00144 591 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 RAB11FIP3O75154 756 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 ADORA1P30542 326 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 KCNJ4P48050 445 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 HSP90AB4PQ58FF6 505 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 TNNI3KQ59H18 835 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 TMEM67Q5HYA8 995 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 SFRP5Q5T4F7 317 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 UBE3DQ7Z6J8 389 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 ERC1Q8IUD2 1116 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 SMC5Q8IY18 1101 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 LPIN2Q92539 896 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 LIN37Q96GY3 246 aaPredicted RBP10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 FAM84BQ96KN1 310 aaPredicted RBP10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 CARS2Q9HA77 564 aaKnown RBP10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 GNEQ9Y223 722 aaKnown RBP10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 FPGT-TNNI3KV9GXZ4 949 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 SCN9AQ15858 1988 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 ZNF541Q9H0D2 1346 aa10.73□□□□□ -0.69
CCDC90B-217ENST00000530253 PSME4Q14997 1843 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 A0A1B0GUL7 405 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 PAGE1O75459 146 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 ZNF865P0CJ78 1059 aaPredicted RBP10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 GDNFP39905 211 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 GYG1P46976 350 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 OS9Q13438 667 aaPredicted RBP10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 HDXQ7Z353 690 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 FBXO33Q7Z6M2 555 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 MFSD2AQ8NA29 543 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 EAF2Q96CJ1 260 aaPredicted RBP10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 KIF1BPQ96EK5 621 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 COX4I2Q96KJ9 171 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 DBNDD1Q9H9R9 158 aa10.72□□□□□ -0.69
CCDC90B-217ENST00000530253 ECE2O60344 883 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 IFIT1P09914 478 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 SLC5A1P13866 664 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 IL1R1P14778 569 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 TIMM10P62072 90 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 ALG1LQ6GMV1 187 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 NIM1KQ8IY84 436 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 HSPA12BQ96MM6 686 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 COA1Q9GZY4 146 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 CD209Q9NNX6 404 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 IL1RAPL2Q9NP60 686 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 DBNLQ9UJU6 430 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 ZNRF3Q9ULT6 936 aa10.71□□□□□ -0.69
CCDC90B-217ENST00000530253 PCNTO95613 3336 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 PRAMEF27A3QJZ7 478 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 SMARCA5O60264 1052 aaPredicted RBP10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 CAP2P40123 477 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 PHKA1P46020 1223 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 CXCL9Q07325 125 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 LCE4AQ5TA78 99 aa10.7□□□□□ -0.7
CCDC90B-217ENST00000530253 ZNF804AQ7Z570 1209 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms