RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 CPA1P15085 419 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 KCNJ6P48051 423 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 ERVK-21P61565 698 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 KRT32Q14532 448 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 PGM5Q15124 567 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 NBPF20Q3BBV1 942 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 PUS10Q3MIT2 529 aaKnown RBP17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 BRDTQ58F21 947 aaPredicted RBP17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 SYNE3Q6ZMZ3 975 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 VSIG10LQ86VR7 867 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 AFG1LQ8WV93 481 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 MTG1Q9BT17 334 aaPredicted RBP17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 ZBED2Q9BTP6 218 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 SEC63Q9UGP8 760 aaKnown RBP17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 DDX41Q9UJV9 622 aaKnown RBP17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 BRPF3Q9ULD4 1205 aa17.26■□□□□ 0.35
AP002884.3-204ENST00000529938 RGS20O76081 388 aa17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 GH1P01241 217 aa17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 WDR5P61964 334 aaKnown RBP17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 ARHGAP1Q07960 439 aa17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 BFSP2Q13515 415 aa17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 FAM47CQ5HY64 1035 aa17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 TMTC3Q6ZXV5 915 aa17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 TMCO2Q7Z6W1 182 aaPredicted RBP17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 TGS1Q96RS0 853 aaKnown RBP17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 MTUS1Q9ULD2 1270 aa17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
AP002884.3-204ENST00000529938 SORBS3O60504 671 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 HSPA4P34932 840 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 CHMP4BP1P59074 171 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 NFRKBQ6P4R8 1299 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 APOA5Q6Q788 366 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 HFE2Q6ZVN8 426 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 NEK9Q8TD19 979 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 KCNB2Q92953 911 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 SNX14Q9Y5W7 946 aa17.24■□□□□ 0.35
AP002884.3-204ENST00000529938 KPNA6O60684 536 aa17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 MMP3P08254 477 aa17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 CCND2P30279 289 aa17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 GPKOWQ92917 476 aaPredicted RBP eCLIP17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 JAKMIP1Q96N16 626 aaKnown RBP17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 PHOX2BQ99453 314 aa17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 RAD9AQ99638 391 aa17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 PTPRSQ13332 1948 aa17.23■□□□□ 0.35
AP002884.3-204ENST00000529938 SCN10AQ9Y5Y9 1956 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 KLF18A0A0U1RQI7 1052 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 MEIS2O14770 477 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 ZBTB43O43298 467 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 GJB5O95377 273 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 HMGB1P09429 215 aaKnown RBP17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 DEFB103AP81534 67 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 FGD1P98174 961 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 SP2Q02086 613 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 PTPN11Q06124 597 aaPredicted RBP17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 GPNMBQ14956 572 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 RTN1Q16799 776 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 CUL5Q93034 780 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 MFSD14AQ96MC6 490 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 RTEL1Q9NZ71 1219 aa17.22■□□□□ 0.35
AP002884.3-204ENST00000529938 TRIP12Q14669 1992 aaPredicted RBP17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 LINC01553A4QN01 128 aa17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 REC8O95072 547 aa17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 MRPS9P82933 396 aaKnown RBP17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 ZP2Q05996 745 aa17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 LAMC2Q13753 1193 aa17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 Q6ZUG5 572 aa17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 BCAS3Q9H6U6 928 aa17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 PSTPIP2Q9H939 334 aa17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 RBM28Q9NW13 759 aaKnown RBP17.21■□□□□ 0.35
AP002884.3-204ENST00000529938 TANC1Q9C0D5 1861 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 C19orf67A6NJJ6 358 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 GOLGA8AA7E2F4 631 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 GOLGA8BA8MQT2 603 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 H3BQ06 376 aaPredicted RBP17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 PIK3CDO00329 1044 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 ST18O60284 1047 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 GGPS1O95749 300 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 CASTP20810 708 aaKnown RBP17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 CDC27P30260 824 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 MYSM1Q5VVJ2 828 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 BLOC1S2Q6QNY1 142 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 HEATR3Q7Z4Q2 680 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 KAT2BQ92831 832 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 FAM217BQ9NTX9 383 aaPredicted RBP17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 PRKAG3Q9UGI9 489 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 NOD1Q9Y239 953 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 V9GY48 417 aaPredicted RBP17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 CNTNAP5Q8WYK1 1306 aa17.2■□□□□ 0.34
AP002884.3-204ENST00000529938 UBA1P22314 1058 aaKnown RBP17.19■□□□□ 0.34
AP002884.3-204ENST00000529938 FUT2Q10981 343 aa17.19■□□□□ 0.34
AP002884.3-204ENST00000529938 DGKDQ16760 1214 aa17.19■□□□□ 0.34
AP002884.3-204ENST00000529938 UBE2SQ16763 222 aa17.19■□□□□ 0.34
AP002884.3-204ENST00000529938 CELF3Q5SZQ8 465 aaKnown RBP17.19■□□□□ 0.34
AP002884.3-204ENST00000529938 CNKSR3Q6P9H4 555 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms