RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 IGFLR1Q9H665 355 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 COL20A1Q9P218 1284 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 INSL6Q9Y581 213 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 SIP14410 1827 aa4.15□□□□□ -1.75
PTPRC-213ENST00000529828 FRYLO94915 3013 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 TECTAO75443 2155 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 LINC01565O15544 149 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 AMHP03971 560 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 ZFYP08048 801 aaPredicted RBP4.14□□□□□ -1.75
PTPRC-213ENST00000529828 EIF2AK2P19525 551 aaKnown RBP4.14□□□□□ -1.75
PTPRC-213ENST00000529828 CASTP20810 708 aaKnown RBP4.14□□□□□ -1.75
PTPRC-213ENST00000529828 CTNNB1P35222 781 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 PTK7Q13308 1070 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 FBXO11Q86XK2 927 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 ADHFE1Q8IWW8 467 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 TAAR1Q96RJ0 339 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 MPHOSPH6Q99547 160 aaKnown RBP4.14□□□□□ -1.75
PTPRC-213ENST00000529828 UBA5Q9GZZ9 404 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 NSUN3Q9H649 340 aaKnown RBP4.14□□□□□ -1.75
PTPRC-213ENST00000529828 DDX19BQ9UMR2 479 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 DMXL1Q9Y485 3027 aa4.14□□□□□ -1.75
PTPRC-213ENST00000529828 RSPH10B2B2RC85 870 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 H3BNC9 293 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 CCER2I3L3R5 266 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 NRG2O14511 850 aaPredicted RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 GRM6O15303 877 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 GFRA3O60609 400 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 EFCAB14O75071 495 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 TBX10O75333 385 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 RSPH10BP0C881 870 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 PDHBP11177 359 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 TOP1P11387 765 aaKnown RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 LTBRP36941 435 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 HAND2P61296 217 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 HTRA4P83105 476 aaPredicted RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 RBL2Q08999 1139 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 HYAL1Q12794 435 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 DGKDQ16760 1214 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 PUS10Q3MIT2 529 aaKnown RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 C20orf194Q5TEA3 1177 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 BTNL9Q6UXG8 535 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 SESTD1Q86VW0 696 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 RNF135Q8IUD6 432 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 TMEM192Q8IY95 271 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 DNERQ8NFT8 737 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 SYTL5Q8TDW5 730 aaPredicted RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 GPATCH3Q96I76 525 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 MFSD14AQ96MC6 490 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 IFIH1Q9BYX4 1025 aaKnown RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 CTNNA3Q9UI47 895 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 MRVI1Q9Y6F6 885 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 PTPRZ1P23471 2315 aaPredicted RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 RIF1Q5UIP0 2472 aaKnown RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 LOC102724159A0A0B4J2E5 919 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 STXBP3O00186 592 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 MBTPS2O43462 519 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 F2P00734 622 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 ZNF543Q08ER8 600 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 TCF15Q12870 199 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 PWP2Q15269 919 aaKnown RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 CDC37Q16543 378 aaPredicted RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 ZMYM1Q5SVZ6 1142 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 IFNLR1Q8IU57 520 aaPredicted RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 GPKOWQ92917 476 aaPredicted RBP eCLIP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 RMDN3Q96TC7 470 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 ZKSCAN3Q9BRR0 538 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 DDX41Q9UJV9 622 aaKnown RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 FAM50BQ9Y247 325 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 SUPT16HQ9Y5B9 1047 aaKnown RBP4.13□□□□□ -1.75
PTPRC-213ENST00000529828 WDR19Q8NEZ3 1342 aa4.13□□□□□ -1.75
PTPRC-213ENST00000529828 C17orf102A2RUQ5 167 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 TMEM221A6NGB7 291 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 M0R296 226 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 HAS3O00219 553 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 TREHO43280 583 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 ORC4O43929 436 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 DHX16O60231 1041 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 PARNO95453 639 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 GGPS1O95749 300 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 MYCLP12524 364 aaPredicted RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 IBSPP21815 317 aaPredicted RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 NOVP48745 357 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 NDUFV1P49821 464 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 VCPP55072 806 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 KCNC4Q03721 635 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SMAD2Q15796 467 aaKnown RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 STXBP2Q15833 593 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 HSDL1Q3SXM5 330 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 PLEKHG4Q58EX7 1191 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 HERC4Q5GLZ8 1057 aaPredicted RBP4.12□□□□□ -1.75
PTPRC-213ENST00000529828 ARHGEF16Q5VV41 709 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 ZNF787Q6DD87 383 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 ANKK1Q8NFD2 765 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 IL31RAQ8NI17 732 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 PPTC7Q8NI37 304 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 PI4K2BQ8TCG2 481 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 ATP6V0A1Q93050 837 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 PBXIP1Q96AQ6 731 aa4.12□□□□□ -1.75
PTPRC-213ENST00000529828 SPATA33Q96N06 139 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms