RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 SYMPKQ92797 1274 aaKnown RBP20.37■□□□□ 0.85
CMTM1-213ENST00000529506 GPKOWQ92917 476 aaPredicted RBP eCLIP20.37■□□□□ 0.85
CMTM1-213ENST00000529506 ATP6V0A1Q93050 837 aa20.37■□□□□ 0.85
CMTM1-213ENST00000529506 CCDC136Q96JN2 1154 aa20.37■□□□□ 0.85
CMTM1-213ENST00000529506 GLT8D2Q9H1C3 349 aa20.37■□□□□ 0.85
CMTM1-213ENST00000529506 A0A0C4DFX4 3053 aa20.36■□□□□ 0.85
CMTM1-213ENST00000529506 hCG_1984214I3L0E3 225 aa20.36■□□□□ 0.85
CMTM1-213ENST00000529506 RCAN1P53805 252 aa20.36■□□□□ 0.85
CMTM1-213ENST00000529506 APOA5Q6Q788 366 aa20.36■□□□□ 0.85
CMTM1-213ENST00000529506 HEATR3Q7Z4Q2 680 aa20.36■□□□□ 0.85
CMTM1-213ENST00000529506 SERINC5Q86VE9 423 aa20.36■□□□□ 0.85
CMTM1-213ENST00000529506 HERC6Q8IVU3 1022 aa20.36■□□□□ 0.85
CMTM1-213ENST00000529506 ZNF713Q8N859 430 aaPredicted RBP20.36■□□□□ 0.85
CMTM1-213ENST00000529506 GPR20Q99678 358 aa20.36■□□□□ 0.85
CMTM1-213ENST00000529506 KAT6AQ92794 2004 aa20.36■□□□□ 0.85
CMTM1-213ENST00000529506 CCDC196A0A1B0GTZ2 297 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 CAND2O75155 1236 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 FOSP01100 380 aaPredicted RBP20.35■□□□□ 0.85
CMTM1-213ENST00000529506 RTN1Q16799 776 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 ZNF618Q5T7W0 954 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 ZBED2Q9BTP6 218 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 TSPYL2Q9H2G4 693 aaPredicted RBP20.35■□□□□ 0.85
CMTM1-213ENST00000529506 RNPEPQ9H4A4 650 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 PCDHA6Q9UN73 950 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 PCDHA8Q9Y5H6 950 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 GBF1Q92538 1859 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 TANC1Q9C0D5 1861 aa20.35■□□□□ 0.85
CMTM1-213ENST00000529506 RSPH10B2B2RC85 870 aa20.34■□□□□ 0.85
CMTM1-213ENST00000529506 RSPH10BP0C881 870 aa20.34■□□□□ 0.85
CMTM1-213ENST00000529506 SMIM10L2AP0DMW4 78 aa20.34■□□□□ 0.85
CMTM1-213ENST00000529506 SMIM10L2BP0DMW5 78 aa20.34■□□□□ 0.85
CMTM1-213ENST00000529506 MYOGP15173 224 aa20.34■□□□□ 0.85
CMTM1-213ENST00000529506 THPOP40225 353 aa20.34■□□□□ 0.85
CMTM1-213ENST00000529506 ZNF200P98182 395 aaPredicted RBP20.34■□□□□ 0.85
CMTM1-213ENST00000529506 SEMA3FQ13275 785 aa20.34■□□□□ 0.85
CMTM1-213ENST00000529506 TRIM71Q2Q1W2 868 aaKnown RBP20.34■□□□□ 0.85
CMTM1-213ENST00000529506 RAB11FIP4Q86YS3 637 aa20.34■□□□□ 0.85
CMTM1-213ENST00000529506 TNPO1Q92973 898 aaKnown RBP20.34■□□□□ 0.85
CMTM1-213ENST00000529506 TLL1O43897 1013 aa20.33■□□□□ 0.85
CMTM1-213ENST00000529506 NBNO60934 754 aa20.33■□□□□ 0.85
CMTM1-213ENST00000529506 CA3P07451 260 aa20.33■□□□□ 0.85
CMTM1-213ENST00000529506 WDR5P61964 334 aaKnown RBP20.33■□□□□ 0.85
CMTM1-213ENST00000529506 UTP14CQ5TAP6 766 aaKnown RBP20.33■□□□□ 0.85
CMTM1-213ENST00000529506 PPP1R18Q6NYC8 613 aa20.33■□□□□ 0.85
CMTM1-213ENST00000529506 RASEFQ8IZ41 740 aa20.33■□□□□ 0.85
CMTM1-213ENST00000529506 SEPT1Q8WYJ6 367 aa20.33■□□□□ 0.85
CMTM1-213ENST00000529506 COL25A1Q9BXS0 654 aaPredicted RBP20.33■□□□□ 0.85
CMTM1-213ENST00000529506 BCAS3Q9H6U6 928 aa20.33■□□□□ 0.85
CMTM1-213ENST00000529506 UBIAD1Q9Y5Z9 338 aa20.33■□□□□ 0.85
CMTM1-213ENST00000529506 V9GY48 417 aaPredicted RBP20.33■□□□□ 0.85
CMTM1-213ENST00000529506 NRCAMQ92823 1304 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 hCG_1642624A0A1W2PR95 340 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 GTPBP6O43824 516 aaPredicted RBP20.32■□□□□ 0.84
CMTM1-213ENST00000529506 LGR5O75473 907 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 HOXC8P31273 242 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 NAPAP54920 295 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 MTMR1Q13613 665 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 COL9A3Q14050 684 aaPredicted RBP20.32■□□□□ 0.84
CMTM1-213ENST00000529506 GPNMBQ14956 572 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 PPM1EQ8WY54 764 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 RIC8AQ9NPQ8 531 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 JADE2Q9NQC1 790 aa20.32■□□□□ 0.84
CMTM1-213ENST00000529506 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 GOLGA8AA7E2F4 631 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 GOLGA8BA8MQT2 603 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 TREHO43280 583 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 REC8O95072 547 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 ADGRE1Q14246 886 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 UBE2SQ16763 222 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 ADCK5Q3MIX3 580 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 SKAP1Q86WV1 359 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 ATXN2LQ8WWM7 1075 aaKnown RBP20.31■□□□□ 0.84
CMTM1-213ENST00000529506 SMARCAD1Q9H4L7 1026 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 BRPF3Q9ULD4 1205 aa20.31■□□□□ 0.84
CMTM1-213ENST00000529506 NAP1L2Q9ULW6 460 aaPredicted RBP20.31■□□□□ 0.84
CMTM1-213ENST00000529506 KCNA2P16389 499 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 ITGB5P18084 799 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 POU3F3P20264 500 aaPredicted RBP20.3■□□□□ 0.84
CMTM1-213ENST00000529506 PSMA5P28066 241 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 TCF7P36402 384 aaPredicted RBP20.3■□□□□ 0.84
CMTM1-213ENST00000529506 ADCY7P51828 1080 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 SP4Q02446 784 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 WWC2Q6AWC2 1192 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 MCTP2Q6DN12 878 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 KCNB2Q92953 911 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 TCEANC2Q96MN5 208 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 RAD9AQ99638 391 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 SETD4Q9NVD3 440 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 ERAP1Q9NZ08 941 aa20.3■□□□□ 0.84
CMTM1-213ENST00000529506 CNTNAP5Q8WYK1 1306 aa20.29■□□□□ 0.84
CMTM1-213ENST00000529506 SMCO2A6NFE2 343 aa20.29■□□□□ 0.84
CMTM1-213ENST00000529506 ATP9AO75110 1047 aa20.29■□□□□ 0.84
CMTM1-213ENST00000529506 RPLP2P05387 115 aaKnown RBP20.29■□□□□ 0.84
CMTM1-213ENST00000529506 AP3B2Q13367 1082 aa20.29■□□□□ 0.84
CMTM1-213ENST00000529506 HIC1Q14526 733 aa20.29■□□□□ 0.84
CMTM1-213ENST00000529506 TJAP1Q5JTD0 557 aa20.29■□□□□ 0.84
CMTM1-213ENST00000529506 TRAF7Q6Q0C0 670 aa20.29■□□□□ 0.84
CMTM1-213ENST00000529506 BLOC1S2Q6QNY1 142 aa20.29■□□□□ 0.84
CMTM1-213ENST00000529506 RSPH3Q86UC2 560 aa20.29■□□□□ 0.84
CMTM1-213ENST00000529506 SEPT8Q92599 483 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms