RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 SPOCD1Q6ZMY3 1216 aa6.79□□□□□ -1.32
CTR9-204ENST00000529355 C16orf59Q7L2K0 433 aa6.79□□□□□ -1.32
CTR9-204ENST00000529355 STK32CQ86UX6 486 aa6.79□□□□□ -1.32
CTR9-204ENST00000529355 MZB1Q8WU39 189 aa6.79□□□□□ -1.32
CTR9-204ENST00000529355 TARS2Q9BW92 718 aaKnown RBP6.79□□□□□ -1.32
CTR9-204ENST00000529355 AP5M1Q9H0R1 490 aa6.79□□□□□ -1.32
CTR9-204ENST00000529355 MYOTQ9UBF9 498 aa6.79□□□□□ -1.32
CTR9-204ENST00000529355 WASF3Q9UPY6 502 aa6.79□□□□□ -1.32
CTR9-204ENST00000529355 PCDHB4Q9Y5E5 795 aa6.79□□□□□ -1.32
CTR9-204ENST00000529355 A0A087X0B3 334 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 ZNF561-AS1K7EIQ3 104 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 M0R2C6 588 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 HRKO00198 91 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 MAN2B1O00754 1011 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 ABLIM1O14639 778 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 FARP2O94887 1054 aaPredicted RBP6.78□□□□□ -1.32
CTR9-204ENST00000529355 LIMS1P48059 325 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 TUSC3Q13454 348 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 SSPNQ14714 243 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 PIK3R6Q5UE93 754 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 CDCA2Q69YH5 1023 aaPredicted RBP6.78□□□□□ -1.32
CTR9-204ENST00000529355 ZCCHC8Q6NZY4 707 aaKnown RBP6.78□□□□□ -1.32
CTR9-204ENST00000529355 TMEFF1Q8IYR6 380 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 UHMK1Q8TAS1 419 aaKnown RBP6.78□□□□□ -1.32
CTR9-204ENST00000529355 EPB41L4AQ9HCS5 686 aaPredicted RBP6.78□□□□□ -1.32
CTR9-204ENST00000529355 SAMD15Q9P1V8 674 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 ASH2LQ9UBL3 628 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 NUDT5Q9UKK9 219 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 DSEQ9UL01 958 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 ZNF652Q9Y2D9 606 aa6.78□□□□□ -1.32
CTR9-204ENST00000529355 FAM90A27PA6NNH2 459 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 TRAF5O00463 557 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 BUB1BO60566 1050 aaPredicted RBP6.77□□□□□ -1.33
CTR9-204ENST00000529355 KPNA6O60684 536 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 ASLP04424 464 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 THBS2P35442 1172 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 IGFALSP35858 605 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 ST5P78524 1137 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 SPIRE1Q08AE8 756 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 TMEM177Q53S58 311 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 CPZQ66K79 652 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 ATG14Q6ZNE5 492 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 LRRTM3Q86VH5 581 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 SYNPOQ8N3V7 929 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 UBR7Q8N806 425 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 FAM84AQ96KN4 292 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 SMOC1Q9H4F8 434 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 SBNO2Q9Y2G9 1366 aa6.77□□□□□ -1.33
CTR9-204ENST00000529355 ACOT7O00154 380 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 N4BP3O15049 544 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 ZBTB7AO95365 584 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 LRG1P02750 347 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 C8BP07358 591 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 MYCLP1P12525 358 aaPredicted RBP6.76□□□□□ -1.33
CTR9-204ENST00000529355 IGFBP6P24592 240 aaPredicted RBP6.76□□□□□ -1.33
CTR9-204ENST00000529355 LACTBP83111 547 aaPredicted RBP6.76□□□□□ -1.33
CTR9-204ENST00000529355 TMEM62Q0P6H9 643 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 GPR19Q15760 415 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 CRY1Q16526 586 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 CR1LQ2VPA4 569 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 AMIGO3Q86WK7 504 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 DDX1Q92499 740 aaKnown RBP6.76□□□□□ -1.33
CTR9-204ENST00000529355 DDX11Q96FC9 970 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 NOX5Q96PH1 765 aa6.76□□□□□ -1.33
CTR9-204ENST00000529355 CELF4Q9BZC1 486 aaKnown RBP6.76□□□□□ -1.33
CTR9-204ENST00000529355 MAGEC2Q9UBF1 373 aaPredicted RBP6.76□□□□□ -1.33
CTR9-204ENST00000529355 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.75□□□□□ -1.33
CTR9-204ENST00000529355 KRTAP9-7A8MTY7 169 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 KRIT1O00522 736 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 MECP2P51608 486 aaKnown RBP6.75□□□□□ -1.33
CTR9-204ENST00000529355 NEK4P51957 841 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 SLC9A5Q14940 896 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 SEPT7Q16181 437 aaKnown RBP6.75□□□□□ -1.33
CTR9-204ENST00000529355 CD300LDQ6UXZ3 194 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 MIB1Q86YT6 1006 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 NXPE1Q8N323 547 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 SMARCC2Q8TAQ2 1214 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 MFSD3Q96ES6 412 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 FAM126AQ9BYI3 521 aaPredicted RBP6.75□□□□□ -1.33
CTR9-204ENST00000529355 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.75□□□□□ -1.33
CTR9-204ENST00000529355 SRPK3Q9UPE1 567 aa6.75□□□□□ -1.33
CTR9-204ENST00000529355 SMG5Q9UPR3 1016 aaKnown RBP6.75□□□□□ -1.33
CTR9-204ENST00000529355 DBX1A6NMT0 343 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 ZNF891A8MT65 544 aaPredicted RBP6.74□□□□□ -1.33
CTR9-204ENST00000529355 GSG1L2A8MUP6 293 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 SEMA7AO75326 666 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 PLA2G1BP04054 148 aaKnown RBP6.74□□□□□ -1.33
CTR9-204ENST00000529355 TMEM253P0C7T8 217 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 ZBTB48P10074 688 aaPredicted RBP6.74□□□□□ -1.33
CTR9-204ENST00000529355 NAT1P18440 290 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 MASP1P48740 699 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 CFAP100Q494V2 611 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 FAM47CQ5HY64 1035 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 PHF19Q5T6S3 580 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 KCTD1Q719H9 257 aa6.74□□□□□ -1.33
CTR9-204ENST00000529355 SCDO00767 359 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 DVL2O14641 736 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 KRT37O76014 449 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 MED14OSP0DP75 135 aa6.73□□□□□ -1.33
CTR9-204ENST00000529355 NCAM1P13591 858 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms