RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 MTERF4Q7Z6M4 381 aaKnown RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 GPC2Q8N158 579 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 CNOT6LQ96LI5 555 aaKnown RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 ERGIC2Q96RQ1 377 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 EIF2AK1Q9BQI3 630 aaKnown RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 NOC4LQ9BVI4 516 aaKnown RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 GLIS2Q9BZE0 524 aaPredicted RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 KCND2Q9NZV8 630 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 DOCK1Q14185 1865 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 ZNF536O15090 1300 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 RPTORQ8N122 1335 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 COBLO75128 1261 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 PSMD10O75832 226 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 PRELPP51888 382 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 RASSF7Q02833 373 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 SUPT20HL1Q3ZLR7 823 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 HERC4Q5GLZ8 1057 aaPredicted RBP16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 XRRA1Q6P2D8 792 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 CCDC84Q86UT8 332 aaPredicted RBP16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 REXO1L1PQ8IX06 675 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 OR8K1Q8NGG5 319 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 C12orf42Q96LP6 360 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 HSD17B14Q9BPX1 270 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 MXRA8Q9BRK3 442 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 CAPN11Q9UMQ6 739 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 LUC7L2Q9Y383 392 aaKnown RBP16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 LOXHD1Q8IVV2 1947 aa16.4■□□□□ 0.22
ECHDC1-220ENST00000528402 A0A1W2PQJ5 194 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 CTIFO43310 598 aaKnown RBP16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 GAP43P17677 238 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 KRT9P35527 623 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 STAT3P40763 770 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 OAZ1P54368 228 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 BACE1P56817 501 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 EPHA7Q15375 998 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 MAN2A1Q16706 1144 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 EDRF1Q3B7T1 1238 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 ZNF280CQ8ND82 737 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 ZNF397Q8NF99 534 aaPredicted RBP16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 CPLX3Q8WVH0 158 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 TBC1D5Q92609 795 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 ZNF592Q92610 1267 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 GJA10Q969M2 543 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 NACC1Q96RE7 527 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 TEKT3Q9BXF9 490 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 ABHD10Q9NUJ1 306 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 FBXO28Q9NVF7 368 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 PCDHA2Q9Y5H9 948 aa16.39■□□□□ 0.21
ECHDC1-220ENST00000528402 GAS7O60861 476 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 EGFRP00533 1210 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 LMNB1P20700 586 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 GIT2Q14161 759 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 VWA3BQ502W6 1294 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 NBPF12Q5TAG4 269 aaPredicted RBP16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 CLEC4DQ8WXI8 215 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 AGBL1Q96MI9 1066 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 MAP7D2Q96T17 732 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 ZNF577Q9BSK1 485 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 EDEM3Q9BZQ6 932 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 EMILIN3Q9NT22 766 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 ZNHIT6Q9NWK9 470 aaKnown RBP16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 COL4A3BPQ9Y5P4 624 aa16.38■□□□□ 0.21
ECHDC1-220ENST00000528402 POTEFA5A3E0 1075 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 PES1O00541 588 aaKnown RBP16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 FLOT1O75955 427 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 VCAM1P19320 739 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 FXR1P51114 621 aaKnown RBP eCLIP16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 MARSP56192 900 aaKnown RBP16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 GOLGA8FQ08AF8 430 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 GOLGA8DPQ0D2H9 430 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 ZCWPW2Q504Y3 356 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 ARSHQ5FYA8 562 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 NOL9Q5SY16 702 aaKnown RBP16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 PCNX4Q63HM2 1172 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 POTEGQ6S5H5 508 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 POTEEQ6S8J3 1075 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 CYP2W1Q8TAV3 490 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 DNAJC7Q99615 494 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 TANGO6Q9C0B7 1094 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 SEL1LQ9UBV2 794 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 FAM184BQ9ULE4 1060 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 FRMPD4Q14CM0 1322 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 ZNF541Q9H0D2 1346 aa16.37■□□□□ 0.21
ECHDC1-220ENST00000528402 B4DLN1 442 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 SLITRK3O94933 977 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 PTPRAP18433 802 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 ZBED6P86452 979 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 CDK17Q00537 523 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 PPP2R3AQ06190 1150 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 SPP2Q13103 211 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 MTMR2Q13614 643 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 PTPN21Q16825 1174 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 TKFCQ3LXA3 575 aa16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 ANGEL2Q5VTE6 544 aaKnown RBP16.36■□□□□ 0.21
ECHDC1-220ENST00000528402 B3GNT9Q6UX72 402 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms