RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SPA17Q15506 151 aa17■□□□□ 0.31
USH1C-207ENST00000527720 PAPD7Q5XG87 772 aaKnown RBP17■□□□□ 0.31
USH1C-207ENST00000527720 ZC3H3Q8IXZ2 948 aaKnown RBP17■□□□□ 0.31
USH1C-207ENST00000527720 LENG9Q96B70 501 aa17■□□□□ 0.31
USH1C-207ENST00000527720 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
USH1C-207ENST00000527720 TRIM10Q9UDY6 481 aa17■□□□□ 0.31
USH1C-207ENST00000527720 TRAF5O00463 557 aa17■□□□□ 0.31
USH1C-207ENST00000527720 PRR16Q569H4 304 aa17■□□□□ 0.31
USH1C-207ENST00000527720 GLIS3Q8NEA6 775 aa17■□□□□ 0.31
USH1C-207ENST00000527720 NUCKS1Q9H1E3 243 aaKnown RBP17■□□□□ 0.31
USH1C-207ENST00000527720 EPC1Q9H2F5 836 aa17■□□□□ 0.31
USH1C-207ENST00000527720 MMRN2Q9H8L6 949 aa17■□□□□ 0.31
USH1C-207ENST00000527720 ARHGEF10LQ9HCE6 1279 aa17■□□□□ 0.31
USH1C-207ENST00000527720 PPIP5K2O43314 1243 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 KIF5AQ12840 1032 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 EDRF1Q3B7T1 1238 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 USH1GQ495M9 461 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 HERC4Q5GLZ8 1057 aaPredicted RBP16.99■□□□□ 0.31
USH1C-207ENST00000527720 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
USH1C-207ENST00000527720 ANKZF1Q9H8Y5 726 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 SMCHD1A6NHR9 2005 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 LOXHD1Q8IVV2 1947 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 YDJCA8MPS7 323 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 USO1O60763 962 aaKnown RBP16.99■□□□□ 0.31
USH1C-207ENST00000527720 CCDC40Q4G0X9 1142 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 CATSPER3Q86XQ3 398 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 SYT2Q8N9I0 419 aaPredicted RBP16.99■□□□□ 0.31
USH1C-207ENST00000527720 NEK11Q8NG66 645 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 KCTD10Q9H3F6 313 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 ZSWIM4Q9H7M6 989 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.99■□□□□ 0.31
USH1C-207ENST00000527720 FAM207AQ9NSI2 230 aaPredicted RBP16.99■□□□□ 0.31
USH1C-207ENST00000527720 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 FAM184BQ9ULE4 1060 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 DNM3Q9UQ16 869 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 SAR1BQ9Y6B6 198 aa16.99■□□□□ 0.31
USH1C-207ENST00000527720 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 KRT18P05783 430 aaKnown RBP16.98■□□□□ 0.31
USH1C-207ENST00000527720 STAT2P52630 851 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 JAG1P78504 1218 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
USH1C-207ENST00000527720 TXLNBQ8N3L3 684 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 RPGRIP1Q96KN7 1286 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 ARHGAP20Q9P2F6 1191 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 PRR12Q9ULL5 1215 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 A0A1W2PRG0 241 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 FAM86B1E9PN63 330 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 OPLAHO14841 1288 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 FAM86B2P0C5J1 330 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 STAT3P40763 770 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 PLA2G4AP47712 749 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 SLC15A2Q16348 729 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 ARSHQ5FYA8 562 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 SCFD1Q8WVM8 642 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 BAP1Q92560 729 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 SYN2Q92777 582 aaPredicted RBP16.98■□□□□ 0.31
USH1C-207ENST00000527720 POLR3CQ9BUI4 534 aaPredicted RBP16.98■□□□□ 0.31
USH1C-207ENST00000527720 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 CEP72Q9P209 647 aa16.98■□□□□ 0.31
USH1C-207ENST00000527720 MYH10P35580 1976 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 POTEFA5A3E0 1075 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 EPHB6O15197 1021 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 ERLIN1O75477 346 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 SEC31AO94979 1220 aaKnown RBP16.97■□□□□ 0.31
USH1C-207ENST00000527720 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 RRP1BQ14684 758 aaKnown RBP16.97■□□□□ 0.31
USH1C-207ENST00000527720 NCAPH2Q6IBW4 605 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 PDXDC1Q6P996 788 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 RSBN1LQ6PCB5 846 aaPredicted RBP16.97■□□□□ 0.31
USH1C-207ENST00000527720 POTEGQ6S5H5 508 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 POTEEQ6S8J3 1075 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 TRIM59Q8IWR1 403 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 FAM151AQ8WW52 585 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 TANGO6Q9C0B7 1094 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 LACRTQ9GZZ8 138 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 TMX2Q9Y320 296 aa16.97■□□□□ 0.31
USH1C-207ENST00000527720 SSU72P8A0A1W2PR75 194 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 RCCD1A6NED2 376 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 KIF11P52732 1056 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 SNAP25P60880 206 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 CKAP4Q07065 602 aaKnown RBP16.96■□□□□ 0.31
USH1C-207ENST00000527720 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
USH1C-207ENST00000527720 SECISBP2LQ93073 1101 aaKnown RBP16.96■□□□□ 0.31
USH1C-207ENST00000527720 VAV3Q9UKW4 847 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 RBBP6Q7Z6E9 1792 aaKnown RBP16.96■□□□□ 0.31
USH1C-207ENST00000527720 LRRC53A6NM62 1247 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 MSH4O15457 936 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 ATP1A1P05023 1023 aaKnown RBP16.96■□□□□ 0.31
USH1C-207ENST00000527720 KCNMA1Q12791 1236 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 GIT2Q14161 759 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 RRAGAQ7L523 313 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 CACNA2D4Q7Z3S7 1137 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 TRIM58Q8NG06 486 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 IFIH1Q9BYX4 1025 aaKnown RBP16.96■□□□□ 0.31
USH1C-207ENST00000527720 UBXN6Q9BZV1 441 aa16.96■□□□□ 0.31
USH1C-207ENST00000527720 ZMYND15Q9H091 742 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms