RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 WDR11Q9BZH6 1224 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 SLC39A2Q9NP94 309 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 HOXC10Q9NYD6 342 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 ADAMTS5Q9UNA0 930 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 SNCAIPQ9Y6H5 919 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 SPATA31C1P0DKV0 1188 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 CCNE1P24864 410 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 NF2P35240 595 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 KCNJ6P48051 423 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 RPS6P62753 249 aaKnown RBP18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 PPP2R5CQ13362 524 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 SH3D19Q5HYK7 790 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 SPECC1LQ69YQ0 1117 aa18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 C16orf45Q96MC5 204 aaPredicted RBP18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 EIF2AK1Q9BQI3 630 aaKnown RBP18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 ADD3Q9UEY8 706 aaKnown RBP18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 LIMA1Q9UHB6 759 aaKnown RBP18.06■□□□□ 0.48
SNRNP35-204ENST00000527158 TRIM49BA6NDI0 452 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 LRRC10BA6NIK2 292 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 KCNJ18B7U540 433 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 KCNJ12Q14500 433 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 TCP11X2Q5H9J9 407 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 PCNX4Q63HM2 1172 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 CEP135Q66GS9 1140 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 DLK2Q6UY11 383 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 NIPA1Q7RTP0 329 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 APTXQ7Z2E3 356 aaKnown RBP18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 GPBP1Q86WP2 473 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 CREBRFQ8IUR6 639 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 CCDC65Q8IXS2 484 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 KIAA0895Q8NCT3 520 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 ZC3H15Q8WU90 426 aaKnown RBP18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 DNAJC19Q96DA6 116 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 WNK4Q96J92 1243 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 THAP9Q9H5L6 903 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 RNF146Q9NTX7 359 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 PANK4Q9NVE7 773 aa18.05■□□□□ 0.48
SNRNP35-204ENST00000527158 IPO5O00410 1097 aaKnown RBP18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 KRT18P05783 430 aaKnown RBP18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 ARP10275 920 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 BCRP11274 1271 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 PMS1P54277 932 aaKnown RBP18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 SNRNP48Q6IEG0 339 aaKnown RBP18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 TTI2Q6NXR4 508 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 ARMCX5Q6P1M9 558 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 NSMFQ6X4W1 530 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 HPS3Q969F9 1004 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 ZFP91Q96JP5 570 aaPredicted RBP18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 MAGEC2Q9UBF1 373 aaPredicted RBP18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 MYPNQ86TC9 1320 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 EML1O00423 815 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 EPHX2P34913 555 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 SLC12A3P55017 1021 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 CYP4A11Q02928 519 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 KRT31Q15323 416 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 PTPN14Q15678 1187 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 GPR162Q16538 588 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 CSGALNACT2Q8N6G5 542 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 REPS2Q8NFH8 660 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 RIT2Q99578 217 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 TEKT3Q9BXF9 490 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 TUFT1Q9NNX1 390 aa18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 POLR2AP24928 1970 aaKnown RBP18.04■□□□□ 0.48
SNRNP35-204ENST00000527158 ATP2A1O14983 1001 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 CHMP2AO43633 222 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 ITGB5P18084 799 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 CYP11B2P19099 503 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 EEF1GP26641 437 aaKnown RBP18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 EHHADHQ08426 723 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 GUF1Q8N442 669 aaKnown RBP18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 SYT2Q8N9I0 419 aaPredicted RBP18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 TAAR1Q96RJ0 339 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 HSD17B14Q9BPX1 270 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 CGNQ9P2M7 1197 aaKnown RBP18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 N4BP3O15049 544 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 CCZ1BP86790 482 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 CCZ1P86791 482 aaPredicted RBP18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 COASYQ13057 564 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 ANKRD40Q6AI12 368 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 SLC30A10Q6XR72 485 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 RMDN3Q96TC7 470 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 TEX13BQ9BXU2 312 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 ZNF214Q9UL59 606 aaPredicted RBP18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 RIPK3Q9Y572 518 aa18.03■□□□□ 0.48
SNRNP35-204ENST00000527158 PHIPQ8WWQ0 1821 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 FRMPD4Q14CM0 1322 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 EIF2AK2P19525 551 aaKnown RBP18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 PSMC6P62333 389 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 PABPC4Q13310 644 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 TMEM132BQ14DG7 1078 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 TKFCQ3LXA3 575 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 ARHGEF16Q5VV41 709 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 CENPPQ6IPU0 288 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 NYAP1Q6ZVC0 841 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 FAM114A1Q8IWE2 563 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 KCNH7Q9NS40 1196 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 RGL1Q9NZL6 768 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 UBIAD1Q9Y5Z9 338 aa18.02■□□□□ 0.48
SNRNP35-204ENST00000527158 TEX33O43247 280 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms