RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TRIM34Q9BYJ4 488 aa19.48■□□□□ 0.71
USH1C-205ENST00000527020 COL4A3BPQ9Y5P4 624 aa19.48■□□□□ 0.71
USH1C-205ENST00000527020 SAR1BQ9Y6B6 198 aa19.48■□□□□ 0.71
USH1C-205ENST00000527020 POTEFA5A3E0 1075 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 LRRC53A6NM62 1247 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 H0YIN7 160 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 OPLAHO14841 1288 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 IPO7O95373 1038 aaKnown RBP19.47■□□□□ 0.71
USH1C-205ENST00000527020 POTEIP0CG38 1075 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 EIF4A3P38919 411 aaKnown RBP19.47■□□□□ 0.71
USH1C-205ENST00000527020 VSNL1P62760 191 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 AOC3Q16853 763 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 POTEGQ6S5H5 508 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 POTEEQ6S8J3 1075 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 CCDC65Q8IXS2 484 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 SLFN12Q8IYM2 578 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 SCFD1Q8WVM8 642 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 KCTD10Q9H3F6 313 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 BMP2KQ9NSY1 1161 aaPredicted RBP19.47■□□□□ 0.71
USH1C-205ENST00000527020 PSME4Q14997 1843 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 TRAF5O00463 557 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 CHRNA5P30532 468 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 KIF11P52732 1056 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 USH1GQ495M9 461 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 Q4G0T1 1027 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 PRR16Q569H4 304 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 SYDE2Q5VT97 1194 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 RRAGAQ7L523 313 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 C7orf43Q8WVR3 580 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 MMS19Q96T76 1030 aa19.47■□□□□ 0.71
USH1C-205ENST00000527020 A0A1W2PRG0 241 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 FAM86B1E9PN63 330 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 GH2P01242 217 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 FAM86B2P0C5J1 330 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 RAD51AP2Q09MP3 1159 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 PDXDC1Q6P996 788 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 FBXO11Q86XK2 927 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 CATSPER3Q86XQ3 398 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 NELFCDQ8IXH7 590 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 ZC3H3Q8IXZ2 948 aaKnown RBP19.46■□□□□ 0.71
USH1C-205ENST00000527020 SMCR8Q8TEV9 937 aaPredicted RBP19.46■□□□□ 0.71
USH1C-205ENST00000527020 CEP63Q96MT8 703 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 ABCB6Q9NP58 842 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 MACROD2A1Z1Q3 448 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 SPATA31C1P0DKV0 1188 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 SREBF1P36956 1147 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 PSMC6P62333 389 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 KIF5AQ12840 1032 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 SMC1AQ14683 1233 aaKnown RBP19.46■□□□□ 0.71
USH1C-205ENST00000527020 HERC4Q5GLZ8 1057 aaPredicted RBP19.46■□□□□ 0.71
USH1C-205ENST00000527020 ZNF771Q7L3S4 317 aaPredicted RBP19.46■□□□□ 0.71
USH1C-205ENST00000527020 GPIHBP1Q8IV16 184 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 PRMT6Q96LA8 375 aaPredicted RBP19.46■□□□□ 0.71
USH1C-205ENST00000527020 PCDHA13Q9Y5I0 950 aa19.46■□□□□ 0.71
USH1C-205ENST00000527020 ANO9A1A5B4 782 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 TBX3O15119 743 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 ENTPD3O75355 529 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 NOL4O94818 638 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 KIF20AO95235 890 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 MARSP56192 900 aaKnown RBP19.45■□□□□ 0.7
USH1C-205ENST00000527020 SPA17Q15506 151 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 ASTE1Q2TB18 679 aaPredicted RBP19.45■□□□□ 0.7
USH1C-205ENST00000527020 BTNL9Q6UXG8 535 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 EDEM3Q9BZQ6 932 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 SH2D4AQ9H788 454 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 L1RE1Q9UN81 338 aa19.45■□□□□ 0.7
USH1C-205ENST00000527020 COL2A1P02458 1487 aaPredicted RBP19.45■□□□□ 0.7
USH1C-205ENST00000527020 YDJCA8MPS7 323 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 BMP3P12645 472 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 OAS2P29728 719 aaKnown RBP19.44■□□□□ 0.7
USH1C-205ENST00000527020 CCDC40Q4G0X9 1142 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 HGSNATQ68CP4 663 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 TRIM59Q8IWR1 403 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 NEK11Q8NG66 645 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 SECISBP2LQ93073 1101 aaKnown RBP19.44■□□□□ 0.7
USH1C-205ENST00000527020 IFIH1Q9BYX4 1025 aaKnown RBP19.44■□□□□ 0.7
USH1C-205ENST00000527020 TSGA10Q9BZW7 698 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 TANGO6Q9C0B7 1094 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 SUGCTQ9HAC7 445 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 EMILIN3Q9NT22 766 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 PITPNM2Q9BZ72 1349 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 HAUS3Q68CZ6 603 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 MCTP2Q6DN12 878 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 ZCCHC17Q9NP64 241 aaKnown RBP19.44■□□□□ 0.7
USH1C-205ENST00000527020 CAPN6Q9Y6Q1 641 aa19.44■□□□□ 0.7
USH1C-205ENST00000527020 PDE2AO00408 941 aaPredicted RBP19.43■□□□□ 0.7
USH1C-205ENST00000527020 RPA1P27694 616 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 CIITAP33076 1130 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 CASP5P51878 434 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 GIT2Q14161 759 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 RBM26Q5T8P6 1007 aaKnown RBP19.43■□□□□ 0.7
USH1C-205ENST00000527020 CAPZA3Q96KX2 299 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 MLXIPQ9HAP2 919 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 TNS1Q9HBL0 1735 aaKnown RBP19.43■□□□□ 0.7
USH1C-205ENST00000527020 MEIS1O00470 390 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 ZNF185O15231 689 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 POLR3GO15318 223 aaPredicted RBP19.43■□□□□ 0.7
USH1C-205ENST00000527020 FOSP01100 380 aaPredicted RBP19.43■□□□□ 0.7
USH1C-205ENST00000527020 HOXA13P31271 388 aaPredicted RBP19.43■□□□□ 0.7
USH1C-205ENST00000527020 USP14P54578 494 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms