RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 SMG8Q8ND04 991 aaKnown RBP4.52□□□□□ -1.69
C11orf54-204ENST00000527003 KCNB2Q92953 911 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 GMLQ99445 158 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 SLC38A3Q99624 504 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 RIOK1Q9BRS2 568 aaKnown RBP4.52□□□□□ -1.69
C11orf54-204ENST00000527003 TMPRSS13Q9BYE2 586 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 TM6SF1Q9BZW5 370 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 NIF3L1Q9GZT8 377 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 NAPBQ9H115 298 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 RNF41Q9H4P4 317 aaPredicted RBP4.52□□□□□ -1.69
C11orf54-204ENST00000527003 LIN7BQ9HAP6 207 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 CYP4F12Q9HCS2 524 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 AATFQ9NY61 560 aaKnown RBP eCLIP4.52□□□□□ -1.69
C11orf54-204ENST00000527003 TMOD2Q9NZR1 351 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 RNF181Q9P0P0 153 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 GNEQ9Y223 722 aaKnown RBP4.52□□□□□ -1.69
C11orf54-204ENST00000527003 DAGLAQ9Y4D2 1042 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 SLC4A4Q9Y6R1 1079 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 DLEC1Q9Y238 1755 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 LTBP1Q14766 1721 aa4.52□□□□□ -1.69
C11orf54-204ENST00000527003 NCANO14594 1321 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 A0A096LPE4 126 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 LOC100289279A0A1B0GTE1 492 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 A0A1W2PPZ6 126 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 IQCA1LA6NCM1 817 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 GSG1L2A8MUP6 293 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ZNF213O14771 459 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 CPNE3O75131 537 aaKnown RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ENTPD3O75355 529 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 BRD1O95696 1058 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 FGAP02671 866 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ZNF865P0CJ78 1059 aaPredicted RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ADMP35318 185 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ANP32AP39687 249 aaKnown RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 BTDP43251 543 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 TDO2P48775 406 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 MCM2P49736 904 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 RBM5P52756 815 aaKnown RBP eCLIP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 PDE4CQ08493 712 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 TRDNQ13061 729 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 TNFAIP1Q13829 316 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 PLCL1Q15111 1095 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 SBK1Q52WX2 424 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 CCDC178Q5BJE1 867 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 C9orf131Q5VYM1 1079 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 CREB3L3Q68CJ9 461 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 APOBEC3HQ6NTF7 200 aaKnown RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ATG4DQ86TL0 474 aaPredicted RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 TTC6Q86TZ1 520 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 TEX11Q8IYF3 940 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 IFNL3Q8IZI9 196 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 LCORLQ8N3X6 602 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 MIGA1Q8NAN2 632 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 BHLHE22Q8NFJ8 381 aaPredicted RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ZNF384Q8TF68 577 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 TMEM40Q8WWA1 233 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 CHMP4CQ96CF2 233 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 HOOK2Q96ED9 719 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 SEC62Q99442 399 aaKnown RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 MTA3Q9BTC8 594 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 IDI2Q9BXS1 227 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 RBCK1Q9BYM8 510 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 DHX36Q9H2U1 1008 aaKnown RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 CNNM2Q9H8M5 875 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ARMT1Q9H993 441 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 DCP1AQ9NPI6 582 aaPredicted RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 KCNQ5Q9NR82 932 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 USP40Q9NVE5 1235 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ARPP21Q9UBL0 812 aaPredicted RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 PRKAG2Q9UGJ0 569 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ZC3H7BQ9UGR2 993 aaKnown RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 CNOT7Q9UIV1 285 aaKnown RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ANAPC4Q9UJX5 808 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 JAG2Q9Y219 1238 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 SLC5A6Q9Y289 635 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 RBM8AQ9Y5S9 174 aaKnown RBP4.51□□□□□ -1.69
C11orf54-204ENST00000527003 ARAP2Q8WZ64 1704 aa4.51□□□□□ -1.69
C11orf54-204ENST00000527003 GLTPD2A6NH11 291 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 F8W031 263 aaPredicted RBP4.5□□□□□ -1.69
C11orf54-204ENST00000527003 EIF1AYO14602 144 aaKnown RBP4.5□□□□□ -1.69
C11orf54-204ENST00000527003 PRRG2O14669 202 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 SLC27A2O14975 620 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 HLA-DOAP06340 250 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 CTSBP07858 339 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 TNNI2P48788 182 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 ARL4DP49703 201 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 GMPSP49915 693 aaPredicted RBP4.5□□□□□ -1.69
C11orf54-204ENST00000527003 USP11P51784 963 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 RHBDL3P58872 404 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 CYP27A1Q02318 531 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 PTH1RQ03431 593 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 PDE4BQ07343 736 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 PPARAQ07869 468 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 PCDH1Q08174 1060 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 BECN1Q14457 450 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 ANKRD1Q15327 319 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 ZNF423Q2M1K9 1284 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 CFAP100Q494V2 611 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 KIAA0319Q5VV43 1072 aa4.5□□□□□ -1.69
C11orf54-204ENST00000527003 CDC42EP5Q6NZY7 148 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms