RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 GPR155Q7Z3F1 870 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 CPLX3Q8WVH0 158 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 BTN2A2Q8WVV5 523 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 CHAMP1Q96JM3 812 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 LMF1Q96S06 567 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 CSRNP2Q9H175 543 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 IKZF4Q9H2S9 585 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 SEC61A2Q9H9S3 476 aa4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 ZFR2Q9UPR6 939 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-219ENST00000526299 MEFVO15553 781 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 TBX1O43435 398 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 LCP1P13796 627 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 ECI1P42126 302 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 EMC4Q5J8M3 183 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 Q6ZUG5 572 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 PROSER1Q86XN7 944 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 GIMAP8Q8ND71 665 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 EXTL1Q92935 676 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 SHDQ96IW2 340 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 SPATA32Q96LK8 384 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 MYOTQ9UBF9 498 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 PCDHA2Q9Y5H9 948 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 SLC4A7Q9Y6M7 1214 aa4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 WDR33Q9C0J8 1336 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-219ENST00000526299 H7BY64 318 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 PLSCR1O15162 318 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 NARSO43776 548 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 CASP7P55210 303 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 PTH1RQ03431 593 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 KCNAB2Q13303 367 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 LSAMPQ13449 338 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 PRSS53Q2L4Q9 553 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 ZNF575Q86XF7 245 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 KREMEN2Q8NCW0 462 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 CEP89Q96ST8 783 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 CLDND1Q9NY35 253 aa4.84□□□□□ -1.63
ECHDC1-219ENST00000526299 SNRPB2P08579 225 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 NAT2P11245 290 aa4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 CSF2RBP32927 897 aa4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 ZNF143P52747 638 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 SF1Q15637 639 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 SMAD2Q15796 467 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 LSM12Q3MHD2 195 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 AGBL4Q5VU57 503 aa4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 TAX1BP1Q86VP1 789 aa4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 FAM169BQ8N8A8 192 aa4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 DTX3Q8N9I9 347 aa4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 AJUBAQ96IF1 538 aa4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 TRIM8Q9BZR9 551 aa4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 HSPBP1Q9NZL4 362 aa4.83□□□□□ -1.64
ECHDC1-219ENST00000526299 DGKIO75912 1065 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 KNG1P01042 644 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 COMTP21964 271 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 HOXC12P31275 282 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 NASPP49321 788 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 GRIN1Q05586 938 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 DPTQ07507 201 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 VASNQ6EMK4 673 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 PPIL6Q8IXY8 311 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 FUKQ8N0W3 1084 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 EDAQ92838 391 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 GPRASP2Q96D09 838 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 SMOC1Q9H4F8 434 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 EPB41L1Q9H4G0 881 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 DLL4Q9NR61 685 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 ASH2LQ9UBL3 628 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 PTPN22Q9Y2R2 807 aa4.82□□□□□ -1.64
ECHDC1-219ENST00000526299 SLC27A2O14975 620 aa4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 MCM7P33993 719 aa4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 LTBRP36941 435 aa4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 GLRBP48167 497 aa4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 PURAQ00577 322 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 ACBD5Q5T8D3 534 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 DENND5AQ6IQ26 1287 aa4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 PHOSPHO1Q8TCT1 267 aa4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 RASGRP4Q8TDF6 673 aa4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 ZFP69BQ9UJL9 534 aa4.81□□□□□ -1.64
ECHDC1-219ENST00000526299 FBXO21O94952 628 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 SCG5P05408 212 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 CKMP06732 381 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 ITGAVP06756 1048 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 ZNF888P0CJ79 500 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 KCNJ6P48051 423 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 NANOS3P60323 173 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 TESK1Q15569 626 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 Q6ZSN1 163 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 ZNF227Q86WZ6 799 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 RBM12BQ8IXT5 1001 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 IFNL2Q8IZJ0 200 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 AMER2Q8N7J2 671 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 STPG3Q8N7X2 389 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 NEU4Q8WWR8 484 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 CLEC4DQ8WXI8 215 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 NEIL1Q96FI4 390 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 LRP2BPQ9P2M1 347 aa4.8□□□□□ -1.64
ECHDC1-219ENST00000526299 SCAMP3O14828 347 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 CPP00450 1065 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 C1SP09871 688 aa4.79□□□□□ -1.64
ECHDC1-219ENST00000526299 ACO1P21399 889 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms