RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 DIP2AQ14689 1571 aa6.09□□□□□ -1.43
USP48-211ENST00000526044 SETD1AO15047 1707 aaKnown RBP6.08□□□□□ -1.44
USP48-211ENST00000526044 A0A1W2PQU0 124 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 PDPK1O15530 556 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 CPP00450 1065 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 THBDP07204 575 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 PLS3P13797 630 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 CORO7P57737 925 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 RBM10P98175 930 aaKnown RBP6.08□□□□□ -1.44
USP48-211ENST00000526044 MVKQ03426 396 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 SAFB2Q14151 953 aaKnown RBP eCLIP6.08□□□□□ -1.44
USP48-211ENST00000526044 ADGRF1Q5T601 910 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 CPNE8Q86YQ8 564 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 FBXO15Q8NCQ5 510 aaPredicted RBP6.08□□□□□ -1.44
USP48-211ENST00000526044 ZNF669Q96BR6 464 aaPredicted RBP6.08□□□□□ -1.44
USP48-211ENST00000526044 PRAM1Q96QH2 718 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 PDLIM7Q9NR12 457 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 CLEC1BQ9P126 229 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 PTPRUQ92729 1446 aa6.08□□□□□ -1.44
USP48-211ENST00000526044 EIF3AQ14152 1382 aaKnown RBP6.07□□□□□ -1.44
USP48-211ENST00000526044 USP47Q96K76 1375 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 CENPJQ9HC77 1338 aaPredicted RBP6.07□□□□□ -1.44
USP48-211ENST00000526044 ADGRB1O14514 1584 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 A0A1W2PQJ5 194 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 CAPNS1P04632 268 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 MPOP05164 745 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 SCG5P05408 212 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 SNRPB2P08579 225 aaKnown RBP6.07□□□□□ -1.44
USP48-211ENST00000526044 TMEM253P0C7T8 217 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 C1QTNF9P0C862 333 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 BUD31P41223 144 aaPredicted RBP6.07□□□□□ -1.44
USP48-211ENST00000526044 ECI1P42126 302 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 KCNJ6P48051 423 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 ERVFRD-1P60508 538 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 PPP2R2AP63151 447 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 SERINC3Q13530 473 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 RASGRF1Q13972 1273 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 HSP90AA2PQ14568 343 aaPredicted RBP6.07□□□□□ -1.44
USP48-211ENST00000526044 IQCEQ6IPM2 695 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 FRS2Q8WU20 508 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 DRC1Q96MC2 740 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 MMP19Q99542 508 aa6.07□□□□□ -1.44
USP48-211ENST00000526044 ZNF552Q9H707 407 aaPredicted RBP6.07□□□□□ -1.44
USP48-211ENST00000526044 CCDC85CA6NKD9 419 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 NPHS1O60500 1241 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 MSL3P1P0C860 447 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 TMF1P82094 1093 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 CYP4F3Q08477 520 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 SF1Q15637 639 aaKnown RBP6.06□□□□□ -1.44
USP48-211ENST00000526044 LRP10Q7Z4F1 713 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 ZNF605Q86T29 641 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 LRRC47Q8N1G4 583 aaKnown RBP6.06□□□□□ -1.44
USP48-211ENST00000526044 NPLOC4Q8TAT6 608 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 PMFBP1Q8TBY8 1022 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 FAM135BQ49AJ0 1406 aa6.06□□□□□ -1.44
USP48-211ENST00000526044 ASXL1Q8IXJ9 1541 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 DLC1Q96QB1 1528 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 EVC2Q86UK5 1308 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 ZNF335Q9H4Z2 1342 aaPredicted RBP6.05□□□□□ -1.44
USP48-211ENST00000526044 C7orf72A4D263 438 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 HRKO00198 91 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 ABLIM1O14639 778 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 PEX10O60683 326 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 SDHBP21912 280 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 GRIA2P42262 883 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 GFRA1P56159 465 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 CTSWP56202 376 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 TMEM62Q0P6H9 643 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 MTERF2Q49AM1 385 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 E4F1Q66K89 784 aaPredicted RBP6.05□□□□□ -1.44
USP48-211ENST00000526044 CIAPIN1Q6FI81 312 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 AMIGO3Q86WK7 504 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 KREMEN2Q8NCW0 462 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 MKL1Q969V6 931 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 TESK2Q96S53 571 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 DNAJC2Q99543 621 aaKnown RBP6.05□□□□□ -1.44
USP48-211ENST00000526044 POLR3GLQ9BT43 218 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 KCNK12Q9HB15 430 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 TNFRSF12AQ9NP84 129 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 KNDC1Q76NI1 1749 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 ARHGEF28Q8N1W1 1705 aaKnown RBP6.05□□□□□ -1.44
USP48-211ENST00000526044 PLEKHH1Q9ULM0 1364 aa6.05□□□□□ -1.44
USP48-211ENST00000526044 NPIPB6E9PJ23 425 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 MEFVO15553 781 aaPredicted RBP6.04□□□□□ -1.44
USP48-211ENST00000526044 INHBBP09529 407 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 YBX1P67809 324 aaKnown RBP6.04□□□□□ -1.44
USP48-211ENST00000526044 NR1I3Q14994 352 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 RAB3GAP1Q15042 981 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 ACBD5Q5T8D3 534 aaPredicted RBP6.04□□□□□ -1.44
USP48-211ENST00000526044 OLFML2BQ68BL8 750 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 BICRALQ6AI39 1079 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 SPATC1Q76KD6 591 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 LZTR1Q8N653 840 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 KCTD13Q8WZ19 329 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 DIO2Q92813 273 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 KCNN1Q92952 543 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 AARSD1Q9BTE6 412 aaKnown RBP6.04□□□□□ -1.44
USP48-211ENST00000526044 IER2Q9BTL4 223 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 CDK19Q9BWU1 502 aa6.04□□□□□ -1.44
USP48-211ENST00000526044 SPATA9Q9BWV2 254 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms