RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 CTC1Q2NKJ3 1217 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 CELF3Q5SZQ8 465 aaKnown RBP14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 MYSM1Q5VVJ2 828 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 TBC1D10CQ8IV04 446 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 FAM227BQ96M60 508 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 POP1Q99575 1024 aaKnown RBP14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 C16orf70Q9BSU1 422 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 MAF1Q9H063 256 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 NEDD4P46934 1319 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 PLXNA3P51805 1871 aa14.57□□□□□ -0.08
CCDC90B-205ENST00000525916 GRM6O15303 877 aa14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 PPFIA4O75335 1185 aa14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 LINC00271P0C7V0 271 aa14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 HSPD1P10809 573 aaKnown RBP14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 HOXC8P31273 242 aa14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 IER5LQ5T953 404 aa14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 MFSD6Q6ZSS7 791 aa14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 ZNF589Q86UQ0 364 aaPredicted RBP14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 PNMA1Q8ND90 353 aa14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 HELLSQ9NRZ9 838 aa14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 MRPL11Q9Y3B7 192 aaKnown RBP14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 ZMYM6O95789 1325 aa14.56□□□□□ -0.08
CCDC90B-205ENST00000525916 ZDBF2Q9HCK1 2354 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 C5orf67F2Z3F1 127 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 STXBP3O00186 592 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 OPLAHO14841 1288 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 LINC01565O15544 149 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 NCK2O43639 380 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 DHX16O60231 1041 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 SMIM10L2AP0DMW4 78 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 SMIM10L2BP0DMW5 78 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 UBA1P22314 1058 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 HSD17B4P51659 736 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 SP2Q02086 613 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 SMAD4Q13485 552 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 FIBCD1Q8N539 461 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 IL31RAQ8NI17 732 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 EDAQ92838 391 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 GPKOWQ92917 476 aaPredicted RBP eCLIP14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 ZFP91Q96JP5 570 aaPredicted RBP14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 PDCD2LQ9BRP1 358 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 LMAN2LQ9H0V9 348 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 IGFLR1Q9H665 355 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 VAT1LQ9HCJ6 419 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 SALL3Q9BXA9 1300 aa14.55□□□□□ -0.08
CCDC90B-205ENST00000525916 H3BRB1 525 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 LGALS2P05162 132 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 PTPN5P54829 565 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 EVI5LQ96CN4 794 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 IL17RAQ96F46 866 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 C11orf84Q9BUA3 381 aaPredicted RBP14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 RNPEPQ9H4A4 650 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 TUT1Q9H6E5 874 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 JMJD4Q9H9V9 463 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 CD207Q9UJ71 328 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 CCDC171Q6TFL3 1326 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 ADGRA3Q8IWK6 1321 aa14.54□□□□□ -0.08
CCDC90B-205ENST00000525916 TMEM221A6NGB7 291 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 M0R296 226 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 CAND2O75155 1236 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 RB1P06400 928 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 PCP11498 1178 aaKnown RBP14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 BMPR1AP36894 532 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 PGM5Q15124 567 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 MCMDC2Q4G0Z9 681 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 ASPRV1Q53RT3 343 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 KCNV1Q6PIU1 500 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 BMP8AQ7Z5Y6 402 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 DGKHQ86XP1 1220 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 ESR2Q92731 530 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 APBB2Q92870 758 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 PBXIP1Q96AQ6 731 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 BCAS3Q9H6U6 928 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 KAT14Q9H8E8 782 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 MLXIPQ9HAP2 919 aa14.53□□□□□ -0.08
CCDC90B-205ENST00000525916 ST18O60284 1047 aa14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 HOXA13P31271 388 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 TCF15Q12870 199 aa14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 NMIQ13287 307 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 TRIM67Q6ZTA4 783 aa14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 RWDD1Q9H446 243 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 RNF41Q9H4P4 317 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 RC3H2Q9HBD1 1191 aaKnown RBP14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 SETD4Q9NVD3 440 aa14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 RWDD3Q9Y3V2 267 aa14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 FNDC1Q4ZHG4 1894 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-205ENST00000525916 PPP1R11O60927 126 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 IGHDP01880 384 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 MMP1P03956 469 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 NDUFV1P49821 464 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 GHRHRQ02643 423 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 STOX1Q6ZVD7 989 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 VSIG10LQ86VR7 867 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 IQCA1Q86XH1 822 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 TRIM50Q86XT4 487 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 SUGP1Q8IWZ8 645 aaKnown RBP14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 SMC5Q8IY18 1101 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 CLP1Q92989 425 aaKnown RBP14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 MSLNLQ96KJ4 702 aa14.51□□□□□ -0.09
CCDC90B-205ENST00000525916 AMNQ9BXJ7 453 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms