RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 C17orf102A2RUQ5 167 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 GOLGA8AA7E2F4 631 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 GOLGA8BA8MQT2 603 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 CKBP12277 381 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 HSPA4P34932 840 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 NAPAP54920 295 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 UBE2SQ16763 222 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 GLT8D2Q9H1C3 349 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 NAP1L2Q9ULW6 460 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-209ENST00000525854 PCDHA6Q9UN73 950 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 YBX2Q9Y2T7 364 aaKnown RBP13.34□□□□□ -0.27
HIF3A-209ENST00000525854 PCDHA8Q9Y5H6 950 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 V9GY48 417 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-209ENST00000525854 CNTNAP5Q8WYK1 1306 aa13.34□□□□□ -0.27
HIF3A-209ENST00000525854 KIF28PB7ZC32 967 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 DLL1O00548 723 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 MAFGO15525 162 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 FOSP01100 380 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-209ENST00000525854 CXCL10P02778 98 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 SMIM10L2AP0DMW4 78 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 SMIM10L2BP0DMW5 78 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 GNAT1P11488 350 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 KCNJ6P48051 423 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 ADCY7P51828 1080 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 RABGGTBP53611 331 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 FUT2Q10981 343 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 MTMR1Q13613 665 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 PPP2R2DQ66LE6 453 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 WWC2Q6AWC2 1192 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 SERINC5Q86VE9 423 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 ATP6V0A1Q93050 837 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 JAKMIP1Q96N16 626 aaKnown RBP13.33□□□□□ -0.28
HIF3A-209ENST00000525854 PRDM12Q9H4Q4 367 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 BCAS3Q9H6U6 928 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 RIC8AQ9NPQ8 531 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 UBIAD1Q9Y5Z9 338 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 EMSYQ7Z589 1322 aa13.33□□□□□ -0.28
HIF3A-209ENST00000525854 EFCAB14O75071 495 aa13.32□□□□□ -0.28
HIF3A-209ENST00000525854 ITGB5P18084 799 aa13.32□□□□□ -0.28
HIF3A-209ENST00000525854 PSMA5P28066 241 aa13.32□□□□□ -0.28
HIF3A-209ENST00000525854 HOXC8P31273 242 aa13.32□□□□□ -0.28
HIF3A-209ENST00000525854 METAP2P50579 478 aaKnown RBP eCLIP13.32□□□□□ -0.28
HIF3A-209ENST00000525854 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
HIF3A-209ENST00000525854 SP4Q02446 784 aa13.32□□□□□ -0.28
HIF3A-209ENST00000525854 TRIM71Q2Q1W2 868 aaKnown RBP13.32□□□□□ -0.28
HIF3A-209ENST00000525854 CNKSR3Q6P9H4 555 aa13.32□□□□□ -0.28
HIF3A-209ENST00000525854 JADE2Q9NQC1 790 aa13.32□□□□□ -0.28
HIF3A-209ENST00000525854 BARHL2Q9NY43 387 aa13.32□□□□□ -0.28
HIF3A-209ENST00000525854 SNX14Q9Y5W7 946 aa13.32□□□□□ -0.28
HIF3A-209ENST00000525854 ABHD14A-ACY1A0A1B0GW23 586 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 EPB41L2O43491 1005 aaKnown RBP13.31□□□□□ -0.28
HIF3A-209ENST00000525854 NBNO60934 754 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 CAND2O75155 1236 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 KCNA2P16389 499 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 CDC27P30260 824 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 THPOP40225 353 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 AP3B2Q13367 1082 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 IKBKEQ14164 716 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 GPNMBQ14956 572 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 ZNF618Q5T7W0 954 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 UTP14CQ5TAP6 766 aaKnown RBP13.31□□□□□ -0.28
HIF3A-209ENST00000525854 Q6ZUG5 572 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 HERC6Q8IVU3 1022 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 FBXL16Q8N461 479 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 SEPT1Q8WYJ6 367 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 BRF1Q92994 677 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 RNPEPQ9H4A4 650 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 FAM217BQ9NTX9 383 aaPredicted RBP13.31□□□□□ -0.28
HIF3A-209ENST00000525854 MYH7BA7E2Y1 1941 aa13.31□□□□□ -0.28
HIF3A-209ENST00000525854 TANC1Q9C0D5 1861 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 SMCO2A6NFE2 343 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 RSPH10B2B2RC85 870 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 STXBP3O00186 592 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 ATP9AO75110 1047 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 CA3P07451 260 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 RSPH10BP0C881 870 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 CPA1P15085 419 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 MYOGP15173 224 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 RPS6KB1P23443 525 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 TCF7P36402 384 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-209ENST00000525854 WDR5P61964 334 aaKnown RBP13.3□□□□□ -0.28
HIF3A-209ENST00000525854 APOBRQ0VD83 1088 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 HIC1Q14526 733 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 PFKFB3Q16875 520 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-209ENST00000525854 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 TRAF7Q6Q0C0 670 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 TRIM50Q86XT4 487 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 CCDC12Q8WUD4 166 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-209ENST00000525854 WNT8BQ93098 351 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 MXRA8Q9BRK3 442 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 ERAP1Q9NZ08 941 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 NRCAMQ92823 1304 aa13.3□□□□□ -0.28
HIF3A-209ENST00000525854 TREHO43280 583 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 TLL1O43897 1013 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 LGR5O75473 907 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 SCG2P13521 617 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 IGFBP4P22692 258 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 ADD1P35611 737 aaKnown RBP13.29□□□□□ -0.28
HIF3A-209ENST00000525854 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms