RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 ATP6V1C1P21283 382 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 CTNNA1P35221 906 aaKnown RBP16.2■□□□□ 0.18
LTBP3-204ENST00000525443 RAD23BP54727 409 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 UBXN1Q04323 297 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 CCDC15Q0P6D6 951 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 ITPK1Q13572 414 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.2■□□□□ 0.18
LTBP3-204ENST00000525443 CTNND2Q9UQB3 1225 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 LUC7L2Q9Y383 392 aaKnown RBP16.2■□□□□ 0.18
LTBP3-204ENST00000525443 AFF2P51816 1311 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 PFDN1O60925 122 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 SCARF1Q14162 830 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 HLTFQ14527 1009 aaKnown RBP eCLIP16.2■□□□□ 0.18
LTBP3-204ENST00000525443 TSR1Q2NL82 804 aaKnown RBP16.2■□□□□ 0.18
LTBP3-204ENST00000525443 INTS5Q6P9B9 1019 aaKnown RBP16.2■□□□□ 0.18
LTBP3-204ENST00000525443 APLFQ8IW19 511 aaPredicted RBP16.2■□□□□ 0.18
LTBP3-204ENST00000525443 TRIML1Q8N9V2 468 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 MOV10L1Q9BXT6 1211 aaKnown RBP16.2■□□□□ 0.18
LTBP3-204ENST00000525443 LRWD1Q9UFC0 647 aa16.2■□□□□ 0.18
LTBP3-204ENST00000525443 E7EWF7 191 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 GSTT1P30711 240 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 USP46P62068 366 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 DEUP1Q05D60 604 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 KIF5AQ12840 1032 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 DPYDQ12882 1025 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 PLCB1Q9NQ66 1216 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 RNF113AO15541 343 aaKnown RBP16.19■□□□□ 0.18
LTBP3-204ENST00000525443 RPL13P26373 211 aaKnown RBP16.19■□□□□ 0.18
LTBP3-204ENST00000525443 ZAP70P43403 619 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 PSMC4P43686 418 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 TTF1Q15361 905 aaPredicted RBP16.19■□□□□ 0.18
LTBP3-204ENST00000525443 UAP1Q16222 522 aaPredicted RBP16.19■□□□□ 0.18
LTBP3-204ENST00000525443 SUSD4Q5VX71 490 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 USP49Q70CQ1 688 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 LRRC34Q8IZ02 419 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 KRI1Q8N9T8 703 aaKnown RBP16.19■□□□□ 0.18
LTBP3-204ENST00000525443 MTFR1LQ9H019 292 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 LRRC4CQ9HCJ2 640 aa16.19■□□□□ 0.18
LTBP3-204ENST00000525443 DMAP1Q9NPF5 467 aaPredicted RBP16.19■□□□□ 0.18
LTBP3-204ENST00000525443 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
LTBP3-204ENST00000525443 H0YGN5 161 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 HGSO14964 777 aaPredicted RBP16.18■□□□□ 0.18
LTBP3-204ENST00000525443 MIGA2Q7L4E1 593 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 KRT26Q7Z3Y9 468 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 IFT43Q96FT9 208 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 SWAP70Q9UH65 585 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 CD2APQ9Y5K6 639 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 NFS1Q9Y697 457 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 GOLGA8BA8MQT2 603 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 FLOT1O75955 427 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 CYP11B2P19099 503 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 HSPA9P38646 679 aaKnown RBP16.18■□□□□ 0.18
LTBP3-204ENST00000525443 GJA8P48165 433 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 TRIM14Q14142 442 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 ERMARDQ5T6L9 678 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 WHAMMQ8TF30 809 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 VCXQ9H320 206 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.18■□□□□ 0.18
LTBP3-204ENST00000525443 HYOU1Q9Y4L1 999 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 GOLGA6L10A0A0M3HER8 536 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 GNAZP19086 355 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 RNASE9P60153 205 aaKnown RBP16.18■□□□□ 0.18
LTBP3-204ENST00000525443 ITIH4Q14624 930 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 SEPT14Q6ZU15 432 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 CCNJLQ8IV13 435 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 ZNF34Q8IZ26 560 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 FBF1Q8TES7 1133 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 ZNF317Q96PQ6 595 aaPredicted RBP16.18■□□□□ 0.18
LTBP3-204ENST00000525443 KRT12Q99456 494 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 FAM129AQ9BZQ8 928 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 HELLSQ9NRZ9 838 aa16.18■□□□□ 0.18
LTBP3-204ENST00000525443 PAPPAQ13219 1627 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 AHDC1Q5TGY3 1603 aaPredicted RBP16.17■□□□□ 0.18
LTBP3-204ENST00000525443 KLF18A0A0U1RQI7 1052 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 TACC1O75410 805 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 SERPINB4P48594 390 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 BIRC3Q13489 604 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 PIGWQ7Z7B1 504 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 PURBQ96QR8 312 aaKnown RBP16.17■□□□□ 0.18
LTBP3-204ENST00000525443 SAMD15Q9P1V8 674 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 SUN2Q9UH99 717 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 PALLDQ8WX93 1383 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 SNAP23O00161 211 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 CYLC1P35663 651 aaPredicted RBP16.17■□□□□ 0.18
LTBP3-204ENST00000525443 RNASELQ05823 741 aaKnown RBP16.17■□□□□ 0.18
LTBP3-204ENST00000525443 RUFY4Q6ZNE9 571 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 NHEJ1Q9H9Q4 299 aaPredicted RBP16.17■□□□□ 0.18
LTBP3-204ENST00000525443 SPATA7Q9P0W8 599 aa16.17■□□□□ 0.18
LTBP3-204ENST00000525443 GFPT2O94808 682 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 PEX5P50542 639 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 FAM182BQ5T319 152 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 CC2D2BQ6DHV5 1058 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 CACNA2D4Q7Z3S7 1137 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 APBB1IPQ7Z5R6 666 aaPredicted RBP16.16■□□□□ 0.18
LTBP3-204ENST00000525443 UBLCP1Q8WVY7 318 aaPredicted RBP16.16■□□□□ 0.18
LTBP3-204ENST00000525443 C17orf50Q8WW18 174 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 OSBP2Q969R2 916 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 TRAPPC9Q96Q05 1148 aa16.16■□□□□ 0.18
LTBP3-204ENST00000525443 PNMA3Q9UL41 463 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms