RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 CCL23P55773 120 aa20.02■□□□□ 0.8
NR1H3-228ENST00000525441 SSRP1Q08945 709 aaKnown RBP20.02■□□□□ 0.8
NR1H3-228ENST00000525441 ANKRD1Q15327 319 aa20.02■□□□□ 0.8
NR1H3-228ENST00000525441 RPUSD2Q8IZ73 545 aaKnown RBP20.02■□□□□ 0.8
NR1H3-228ENST00000525441 BICD2Q8TD16 824 aa20.02■□□□□ 0.8
NR1H3-228ENST00000525441 GPR20Q99678 358 aa20.02■□□□□ 0.8
NR1H3-228ENST00000525441 HDAC6Q9UBN7 1215 aa20.02■□□□□ 0.8
NR1H3-228ENST00000525441 GTF2IRD1Q9UHL9 959 aa20.02■□□□□ 0.8
NR1H3-228ENST00000525441 PITPNM1O00562 1244 aa20.01■□□□□ 0.79
NR1H3-228ENST00000525441 LGALS2P05162 132 aa20.01■□□□□ 0.79
NR1H3-228ENST00000525441 SREBF1P36956 1147 aa20.01■□□□□ 0.79
NR1H3-228ENST00000525441 GDF6Q6KF10 455 aaPredicted RBP20.01■□□□□ 0.79
NR1H3-228ENST00000525441 REXO1Q8N1G1 1221 aaKnown RBP20.01■□□□□ 0.79
NR1H3-228ENST00000525441 PGBD1Q96JS3 809 aa20.01■□□□□ 0.79
NR1H3-228ENST00000525441 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.01■□□□□ 0.793e-7■■■□□ 18.1
NR1H3-228ENST00000525441 MXRA8Q9BRK3 442 aa20.01■□□□□ 0.79
NR1H3-228ENST00000525441 LARP6Q9BRS8 491 aaKnown RBP20.01■□□□□ 0.79
NR1H3-228ENST00000525441 C16orf70Q9BSU1 422 aa20.01■□□□□ 0.79
NR1H3-228ENST00000525441 WNT8AQ9H1J5 351 aa20.01■□□□□ 0.79
NR1H3-228ENST00000525441 MTIF3Q9H2K0 278 aaKnown RBP20.01■□□□□ 0.79
NR1H3-228ENST00000525441 BCAS3Q9H6U6 928 aa20.01■□□□□ 0.79
NR1H3-228ENST00000525441 TMEM260Q9NX78 707 aa20.01■□□□□ 0.79
NR1H3-228ENST00000525441 H3BRB1 525 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 PPFIA3O75145 1194 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 CDKL5O76039 1030 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 ACRP10323 421 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 KCNA2P16389 499 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 ZNF76P36508 570 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 SP4Q02446 784 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 STK3Q13188 491 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 CEP55Q53EZ4 464 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 TMEM240Q5SV17 173 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 JAKMIP3Q5VZ66 844 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 CAGE1Q8TC20 777 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 IL17RAQ96F46 866 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 SLKQ9H2G2 1235 aaPredicted RBP20■□□□□ 0.79
NR1H3-228ENST00000525441 TUT1Q9H6E5 874 aaKnown RBP20■□□□□ 0.79
NR1H3-228ENST00000525441 SH3GLB2Q9NR46 395 aa20■□□□□ 0.79
NR1H3-228ENST00000525441 ZNF215Q9UL58 517 aaPredicted RBP20■□□□□ 0.79
NR1H3-228ENST00000525441 ATP9AO75110 1047 aa19.99■□□□□ 0.79
NR1H3-228ENST00000525441 DEXIO95424 95 aa19.99■□□□□ 0.79
NR1H3-228ENST00000525441 PFKMP08237 780 aa19.99■□□□□ 0.79
NR1H3-228ENST00000525441 RFC2P35250 354 aa19.99■□□□□ 0.79
NR1H3-228ENST00000525441 SMAD3P84022 425 aaKnown RBP19.99■□□□□ 0.79
NR1H3-228ENST00000525441 ARHGAP4P98171 946 aa19.99■□□□□ 0.79
NR1H3-228ENST00000525441 ZNF365Q70YC5 407 aa19.99■□□□□ 0.79
NR1H3-228ENST00000525441 C16orf59Q7L2K0 433 aa19.99■□□□□ 0.79
NR1H3-228ENST00000525441 KCNH7Q9NS40 1196 aa19.99■□□□□ 0.79
NR1H3-228ENST00000525441 PKD2L1Q9P0L9 805 aa19.99■□□□□ 0.79
NR1H3-228ENST00000525441 LAMA3Q16787 3333 aa19.98■□□□□ 0.79
NR1H3-228ENST00000525441 FGBP02675 491 aa19.98■□□□□ 0.79
NR1H3-228ENST00000525441 UTP14CQ5TAP6 766 aaKnown RBP19.98■□□□□ 0.79
NR1H3-228ENST00000525441 NIPA1Q7RTP0 329 aa19.98■□□□□ 0.79
NR1H3-228ENST00000525441 SEPT1Q8WYJ6 367 aa19.98■□□□□ 0.79
NR1H3-228ENST00000525441 SCLYQ96I15 445 aa19.98■□□□□ 0.79
NR1H3-228ENST00000525441 SDF4Q9BRK5 362 aa19.98■□□□□ 0.79
NR1H3-228ENST00000525441 VPS54Q9P1Q0 977 aa19.98■□□□□ 0.79
NR1H3-228ENST00000525441 NLRP5P59047 1200 aa19.97■□□□□ 0.79
NR1H3-228ENST00000525441 PTK7Q13308 1070 aa19.97■□□□□ 0.79
NR1H3-228ENST00000525441 FAM109BQ6ICB4 259 aaPredicted RBP19.97■□□□□ 0.79
NR1H3-228ENST00000525441 FAM177A1Q8N128 213 aaPredicted RBP19.97■□□□□ 0.79
NR1H3-228ENST00000525441 DEFB123Q8N688 67 aa19.97■□□□□ 0.79
NR1H3-228ENST00000525441 AFAP1L1Q8TED9 768 aa19.97■□□□□ 0.79
NR1H3-228ENST00000525441 HERVK_113Q902F9 699 aa19.97■□□□□ 0.79
NR1H3-228ENST00000525441 JPH1Q9HDC5 661 aaPredicted RBP19.97■□□□□ 0.79
NR1H3-228ENST00000525441 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.96■□□□□ 0.79
NR1H3-228ENST00000525441 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.96■□□□□ 0.79
NR1H3-228ENST00000525441 C17orf102A2RUQ5 167 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 MEIS1O00470 390 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 PFKFB2O60825 505 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 CYP3A4P08684 503 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 IQCF3P0C7M6 154 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 SMIM10L2AP0DMW4 78 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 SMIM10L2BP0DMW5 78 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 GNAT1P11488 350 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 TCF7P36402 384 aaPredicted RBP19.96■□□□□ 0.79
NR1H3-228ENST00000525441 AK2P54819 239 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 CYP2W1Q8TAV3 490 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 CTAGE1Q96RT6 745 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 SLC9A2Q9UBY0 812 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 TPCN1Q9ULQ1 816 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 NFASCO94856 1347 aa19.96■□□□□ 0.79
NR1H3-228ENST00000525441 PARNO95453 639 aaKnown RBP19.95■□□□□ 0.78
NR1H3-228ENST00000525441 SEC24BO95487 1268 aa19.95■□□□□ 0.78
NR1H3-228ENST00000525441 SELPP16109 830 aa19.95■□□□□ 0.78
NR1H3-228ENST00000525441 RBL2Q08999 1139 aa19.95■□□□□ 0.78
NR1H3-228ENST00000525441 SCRN1Q12765 414 aa19.95■□□□□ 0.78
NR1H3-228ENST00000525441 RASIP1Q5U651 963 aa19.95■□□□□ 0.78
NR1H3-228ENST00000525441 PLA2G4DQ86XP0 818 aa19.95■□□□□ 0.78
NR1H3-228ENST00000525441 TRIM50Q86XT4 487 aa19.95■□□□□ 0.78
NR1H3-228ENST00000525441 C22orf23Q9BZE7 217 aa19.95■□□□□ 0.78
NR1H3-228ENST00000525441 AGO4Q9HCK5 861 aaKnown RBP19.95■□□□□ 0.78
NR1H3-228ENST00000525441 GSTTP1A0A1W2PQM5 241 aa19.94■□□□□ 0.78
NR1H3-228ENST00000525441 ARP10275 920 aa19.94■□□□□ 0.78
NR1H3-228ENST00000525441 ACTN1P12814 892 aa19.94■□□□□ 0.78
NR1H3-228ENST00000525441 NEK4P51957 841 aa19.94■□□□□ 0.78
NR1H3-228ENST00000525441 SETQ01105 290 aaPredicted RBP19.94■□□□□ 0.78
NR1H3-228ENST00000525441 ZNF697Q5TEC3 545 aa19.94■□□□□ 0.78
NR1H3-228ENST00000525441 GALNT17Q6IS24 598 aa19.94■□□□□ 0.78
NR1H3-228ENST00000525441 LRRC8DQ7L1W4 858 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms