RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 LGALS2P05162 132 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 ACTN1P12814 892 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 TYW1BQ6NUM6 668 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 PPP1R18Q6NYC8 613 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 AFAP1L1Q8TED9 768 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 GPRASP2Q96D09 838 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 CDHR1Q96JP9 859 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 SENP7Q9BQF6 1050 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 TUT1Q9H6E5 874 aaKnown RBP21.27■■□□□ 1
CAPN1-203ENST00000525013 RIC8AQ9NPQ8 531 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 MSRAQ9UJ68 235 aa21.27■■□□□ 1
CAPN1-203ENST00000525013 STXBP3O00186 592 aa21.26■□□□□ 0.99
CAPN1-203ENST00000525013 ADCY7P51828 1080 aa21.26■□□□□ 0.99
CAPN1-203ENST00000525013 ZNF200P98182 395 aaPredicted RBP21.26■□□□□ 0.99
CAPN1-203ENST00000525013 GIMAP8Q8ND71 665 aaPredicted RBP21.26■□□□□ 0.99
CAPN1-203ENST00000525013 MYLIPQ8WY64 445 aa21.26■□□□□ 0.99
CAPN1-203ENST00000525013 DHX38Q92620 1227 aaKnown RBP21.26■□□□□ 0.99
CAPN1-203ENST00000525013 GPR20Q99678 358 aa21.26■□□□□ 0.99
CAPN1-203ENST00000525013 USP26Q9BXU7 913 aa21.26■□□□□ 0.99
CAPN1-203ENST00000525013 ZNF576Q9H609 170 aa21.26■□□□□ 0.99
CAPN1-203ENST00000525013 PKD2L1Q9P0L9 805 aa21.26■□□□□ 0.99
CAPN1-203ENST00000525013 SMCO2A6NFE2 343 aa21.25■□□□□ 0.99
CAPN1-203ENST00000525013 hCG_1984214I3L0E3 225 aa21.25■□□□□ 0.99
CAPN1-203ENST00000525013 SELPP16109 830 aa21.25■□□□□ 0.99
CAPN1-203ENST00000525013 ITGB5P18084 799 aa21.25■□□□□ 0.99
CAPN1-203ENST00000525013 PTK7Q13308 1070 aa21.25■□□□□ 0.99
CAPN1-203ENST00000525013 MTMR1Q13613 665 aa21.25■□□□□ 0.99
CAPN1-203ENST00000525013 RAB30Q15771 203 aa21.25■□□□□ 0.99
CAPN1-203ENST00000525013 UTP14CQ5TAP6 766 aaKnown RBP21.25■□□□□ 0.99
CAPN1-203ENST00000525013 ZNF713Q8N859 430 aaPredicted RBP21.25■□□□□ 0.99
CAPN1-203ENST00000525013 BARHL2Q9NY43 387 aa21.25■□□□□ 0.99
CAPN1-203ENST00000525013 ATP9AO75110 1047 aa21.24■□□□□ 0.99
CAPN1-203ENST00000525013 CKBP12277 381 aa21.24■□□□□ 0.99
CAPN1-203ENST00000525013 GRIN2CQ14957 1233 aa21.24■□□□□ 0.99
CAPN1-203ENST00000525013 LRRC8DQ7L1W4 858 aa21.24■□□□□ 0.99
CAPN1-203ENST00000525013 PGBD1Q96JS3 809 aa21.24■□□□□ 0.99
CAPN1-203ENST00000525013 TELO2Q9Y4R8 837 aa21.24■□□□□ 0.99
CAPN1-203ENST00000525013 UBIAD1Q9Y5Z9 338 aa21.24■□□□□ 0.99
CAPN1-203ENST00000525013 C17orf102A2RUQ5 167 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 FOSP01100 380 aaPredicted RBP21.23■□□□□ 0.99
CAPN1-203ENST00000525013 SMIM10L2AP0DMW4 78 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 SMIM10L2BP0DMW5 78 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 KCNA2P16389 499 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 ATP2A2P16615 1042 aaKnown RBP21.23■□□□□ 0.99
CAPN1-203ENST00000525013 RABGGTBP53611 331 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 HIC1Q14526 733 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 ERICH6BQ5W0A0 696 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 TRIM50Q86XT4 487 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 FBXL16Q8N461 479 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 ATP6V0A1Q93050 837 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 ANO3Q9BYT9 981 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 GLT8D2Q9H1C3 349 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 JADE2Q9NQC1 790 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 ZNF215Q9UL58 517 aaPredicted RBP21.23■□□□□ 0.99
CAPN1-203ENST00000525013 A0A0C4DFX4 3053 aa21.23■□□□□ 0.99
CAPN1-203ENST00000525013 CHD9Q3L8U1 2897 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 EPB41L2O43491 1005 aaKnown RBP21.22■□□□□ 0.99
CAPN1-203ENST00000525013 SCG2P13521 617 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 FOSL2P15408 326 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 AKAP17AQ02040 695 aaKnown RBP21.22■□□□□ 0.99
CAPN1-203ENST00000525013 PFKFB3Q16875 520 aaPredicted RBP21.22■□□□□ 0.99
CAPN1-203ENST00000525013 RUFY3Q7L099 469 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 TEX2Q8IWB9 1127 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 WNT8BQ93098 351 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 AGXT2Q9BYV1 514 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 NKX2-4Q9H2Z4 354 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 TMEM260Q9NX78 707 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 CYP46A1Q9Y6A2 500 aa21.22■□□□□ 0.99
CAPN1-203ENST00000525013 MAFGO15525 162 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 PPFIA3O75145 1194 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 PARNO95453 639 aaKnown RBP21.21■□□□□ 0.99
CAPN1-203ENST00000525013 THPOP40225 353 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 RBL2Q08999 1139 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 ZNF618Q5T7W0 954 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 PHKBQ93100 1093 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 MXRA8Q9BRK3 442 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 RNPEPQ9H4A4 650 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 SLC28A3Q9HAS3 691 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 ZSWIM6Q9HCJ5 1215 aa21.21■□□□□ 0.99
CAPN1-203ENST00000525013 YBX2Q9Y2T7 364 aaKnown RBP21.21■□□□□ 0.99
CAPN1-203ENST00000525013 PRPF3O43395 683 aaKnown RBP21.2■□□□□ 0.98
CAPN1-203ENST00000525013 TCF7P36402 384 aaPredicted RBP21.2■□□□□ 0.98
CAPN1-203ENST00000525013 ZNF76P36508 570 aa21.2■□□□□ 0.98
CAPN1-203ENST00000525013 CCT2P78371 535 aaKnown RBP21.2■□□□□ 0.98
CAPN1-203ENST00000525013 TRIM71Q2Q1W2 868 aaKnown RBP21.2■□□□□ 0.98
CAPN1-203ENST00000525013 JAKMIP3Q5VZ66 844 aa21.2■□□□□ 0.98
CAPN1-203ENST00000525013 SERINC5Q86VE9 423 aa21.2■□□□□ 0.98
CAPN1-203ENST00000525013 MAFAQ8NHW3 353 aaPredicted RBP21.2■□□□□ 0.98
CAPN1-203ENST00000525013 CYP2W1Q8TAV3 490 aa21.2■□□□□ 0.98
CAPN1-203ENST00000525013 SEPT1Q8WYJ6 367 aa21.2■□□□□ 0.98
CAPN1-203ENST00000525013 KCNH7Q9NS40 1196 aa21.2■□□□□ 0.98
CAPN1-203ENST00000525013 SETD4Q9NVD3 440 aa21.2■□□□□ 0.98
CAPN1-203ENST00000525013 CDH23Q9H251 3354 aa21.2■□□□□ 0.98
CAPN1-203ENST00000525013 TREHO43280 583 aa21.19■□□□□ 0.98
CAPN1-203ENST00000525013 NBNO60934 754 aa21.19■□□□□ 0.98
CAPN1-203ENST00000525013 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
CAPN1-203ENST00000525013 GNAT1P11488 350 aa21.19■□□□□ 0.98
CAPN1-203ENST00000525013 MYOGP15173 224 aa21.19■□□□□ 0.98
CAPN1-203ENST00000525013 PDIA3P30101 505 aaKnown RBP21.19■□□□□ 0.98
CAPN1-203ENST00000525013 AP3B2Q13367 1082 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms