RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PHF20L1A8MW92 1017 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 HNRNPH3P31942 346 aaKnown RBP14.49□□□□□ -0.09
CAPN1-202ENST00000524773 ITGB3BPQ13352 177 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-202ENST00000524773 SFMBT2Q5VUG0 894 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 B4GALNT4Q76KP1 1039 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 ZNF572Q7Z3I7 529 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-202ENST00000524773 CCDC91Q7Z6B0 441 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 CEP89Q96ST8 783 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 DPH5Q9H2P9 285 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 BCAS3Q9H6U6 928 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 CCDC87Q9NVE4 849 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 SMIM23A6NLE4 172 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 GRM4Q14833 912 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 UBE2SQ16763 222 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 NEK8Q86SG6 692 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 SNX29Q8TEQ0 813 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 LARP4BQ92615 738 aaKnown RBP14.49□□□□□ -0.09
CAPN1-202ENST00000524773 HAUS2Q9NVX0 235 aa14.49□□□□□ -0.09
CAPN1-202ENST00000524773 DNM1LO00429 736 aa14.48□□□□□ -0.09
CAPN1-202ENST00000524773 PRLRP16471 622 aa14.48□□□□□ -0.09
CAPN1-202ENST00000524773 FIGNQ5HY92 759 aa14.48□□□□□ -0.09
CAPN1-202ENST00000524773 CYFIP2Q96F07 1278 aa14.48□□□□□ -0.09
CAPN1-202ENST00000524773 SCLT1Q96NL6 688 aa14.48□□□□□ -0.09
CAPN1-202ENST00000524773 AMACRQ9UHK6 382 aa14.48□□□□□ -0.09
CAPN1-202ENST00000524773 TMCO5BA8MYB1 307 aa14.48□□□□□ -0.09
CAPN1-202ENST00000524773 CTNNA1P35221 906 aaKnown RBP14.48□□□□□ -0.09
CAPN1-202ENST00000524773 SLC9C1Q4G0N8 1177 aa14.48□□□□□ -0.09
CAPN1-202ENST00000524773 ZNF444Q8N0Y2 327 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-202ENST00000524773 UHMK1Q8TAS1 419 aaKnown RBP14.48□□□□□ -0.09
CAPN1-202ENST00000524773 ZKSCAN4Q969J2 545 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-202ENST00000524773 INPP4AQ96PE3 977 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-202ENST00000524773 NOVA2Q9UNW9 492 aaKnown RBP14.48□□□□□ -0.09
CAPN1-202ENST00000524773 DAPK3O43293 454 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 LCA5LO95447 670 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 SLURP2P0DP57 97 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 MKRN4PQ13434 485 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-202ENST00000524773 CALCRLQ16602 461 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 NBPF9Q3BBW0 867 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 CCDC114Q96M63 670 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 DDX20Q9UHI6 824 aaKnown RBP14.47□□□□□ -0.09
CAPN1-202ENST00000524773 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-202ENST00000524773 ECHS1P30084 290 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 HIBADHP31937 336 aaKnown RBP14.47□□□□□ -0.09
CAPN1-202ENST00000524773 TNNI2P48788 182 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 KLHL30Q0D2K2 578 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 FAM98CQ17RN3 349 aaKnown RBP14.47□□□□□ -0.09
CAPN1-202ENST00000524773 SWT1Q5T5J6 900 aaKnown RBP14.47□□□□□ -0.09
CAPN1-202ENST00000524773 OSBPL7Q9BZF2 842 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 SLC40A1Q9NP59 571 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 KLC4Q9NSK0 619 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 FBXL5Q9UKA1 691 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 DOT1LQ8TEK3 1739 aa14.47□□□□□ -0.09
CAPN1-202ENST00000524773 USP17L5A8MUK1 530 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 E9PMD0 336 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 AMPD3Q01432 767 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 CDC37Q16543 378 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-202ENST00000524773 UBAP2Q5T6F2 1119 aaKnown RBP14.46□□□□□ -0.09
CAPN1-202ENST00000524773 MEI1Q5TIA1 1274 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 C12orf60Q5U649 245 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 GJB7Q6PEY0 223 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 CCDC84Q86UT8 332 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-202ENST00000524773 IKZF4Q9H2S9 585 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 ARPP21Q9UBL0 812 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-202ENST00000524773 NR2E1Q9Y466 385 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 PJA2O43164 708 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 EDIL3O43854 480 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 SLC9A1P19634 815 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 SCP2P22307 547 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 ITIH3Q06033 890 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 ZNF844Q08AG5 666 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 UBE4AQ14139 1066 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 NAB2Q15742 525 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 UNC13DQ70J99 1090 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 USP38Q8NB14 1042 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 ATP8A2Q9NTI2 1148 aa14.46□□□□□ -0.09
CAPN1-202ENST00000524773 GOLGA6L7A0A1B0GV03 622 aa14.46□□□□□ -0.1
CAPN1-202ENST00000524773 PTK2Q05397 1052 aa14.46□□□□□ -0.1
CAPN1-202ENST00000524773 GGT7Q9UJ14 662 aa14.46□□□□□ -0.1
CAPN1-202ENST00000524773 GCOM1H8Y6P7 765 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-202ENST00000524773 FSBPO95073 299 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 MYL1P05976 194 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 MYZAPP0CAP1 466 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 ADRA2BP18089 450 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 MAGOHP61326 146 aaKnown RBP14.45□□□□□ -0.1
CAPN1-202ENST00000524773 SOGA3Q5TF21 947 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 MAGOHBQ96A72 148 aaKnown RBP14.45□□□□□ -0.1
CAPN1-202ENST00000524773 TRIM51Q9BSJ1 452 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 ZMYND12Q9H0C1 365 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 TMBIM4Q9HC24 238 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 SH3GLB2Q9NR46 395 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 ARAP2Q8WZ64 1704 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 LRP5O75197 1615 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 PALM3A6NDB9 673 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-202ENST00000524773 GOLGA6L10A6NI86 522 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 TTI1O43156 1089 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 COASYQ13057 564 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 FBXO33Q7Z6M2 555 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 REXO1Q8N1G1 1221 aaKnown RBP14.45□□□□□ -0.1
CAPN1-202ENST00000524773 LRRC47Q8N1G4 583 aaKnown RBP14.45□□□□□ -0.1
CAPN1-202ENST00000524773 GPCPD1Q9NPB8 672 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms