RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	C22orf46	C9J442	243 aa		6.15	□□□□□ -1.42
PCM1-223	ENST00000524356	CACTIN	Q8WUQ7	758 aa	Known RBP	6.15	□□□□□ -1.42
PCM1-223	ENST00000524356	LARP4B	Q92615	738 aa	Known RBP	6.15	□□□□□ -1.42
PCM1-223	ENST00000524356	TM9SF2	Q99805	663 aa		6.15	□□□□□ -1.42
PCM1-223	ENST00000524356	YIPF4	Q9BSR8	244 aa		6.15	□□□□□ -1.42
PCM1-223	ENST00000524356	CLEC1B	Q9P126	229 aa		6.15	□□□□□ -1.42
PCM1-223	ENST00000524356	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.15	□□□□□ -1.42
PCM1-223	ENST00000524356	SLC4A7	Q9Y6M7	1214 aa		6.15	□□□□□ -1.42
PCM1-223	ENST00000524356	TARBP1	Q13395	1621 aa	Known RBP	6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	CYP7B1	O75881	506 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	COMT	P21964	271 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	KRTAP10-9	P60411	292 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	AMPD2	Q01433	879 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	TAGLN	Q01995	201 aa	Known RBP	6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	CSRP2	Q16527	193 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	FNDC7	Q5VTL7	733 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356		Q6ZSN1	163 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	RALYL	Q86SE5	291 aa	Known RBP	6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	NT5C1A	Q9BXI3	368 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	KLHL25	Q9H0H3	589 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	BTG4	Q9NY30	223 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	DMRT1	Q9Y5R6	373 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	SOGA1	O94964	1423 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	GAPVD1	Q14C86	1478 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	CLASP1	Q7Z460	1538 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	ERCC6L2	Q5T890	1561 aa		6.14	□□□□□ -1.43
PCM1-223	ENST00000524356	U2SURP	O15042	1029 aa	Known RBP	6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	KLHL18	O94889	574 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	FPR2	P25090	351 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	TEPP	Q6URK8	271 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	RUFY4	Q6ZNE9	571 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	FBXO33	Q7Z6M2	555 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	C1orf210	Q8IVY1	113 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	ANKRD13A	Q8IZ07	590 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	FUK	Q8N0W3	1084 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	GIMAP8	Q8ND71	665 aa	Predicted RBP	6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	RNF34	Q969K3	372 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	TOE1	Q96GM8	510 aa	Known RBP	6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	DTL	Q9NZJ0	730 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	POLA1	P09884	1462 aa	Predicted RBP	6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	SNAPC4	Q5SXM2	1469 aa		6.13	□□□□□ -1.43
PCM1-223	ENST00000524356	PLS3	P13797	630 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	SF3A1	Q15459	793 aa	Known RBP	6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	INF2	Q27J81	1249 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	GIMAP6	Q6P9H5	292 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	ZNF627	Q7L945	461 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	TAX1BP1	Q86VP1	789 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	RIOX2	Q8IUF8	465 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	ARRDC4	Q8NCT1	418 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	IL17D	Q8TAD2	202 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	WRNIP1	Q96S55	665 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	TMEM209	Q96SK2	561 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	MMP19	Q99542	508 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	MMRN2	Q9H8L6	949 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	MRS2	Q9HD23	443 aa		6.12	□□□□□ -1.43
PCM1-223	ENST00000524356	ANKRD62	A6NC57	917 aa		6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	NCL	P19338	710 aa	Known RBP	6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	GUCY2C	P25092	1073 aa		6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	RBM10	P98175	930 aa	Known RBP	6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	GRB10	Q13322	594 aa		6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	MRGPRG	Q86SM5	289 aa		6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	ARHGEF39	Q8N4T4	335 aa		6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	PLEKHG4B	Q96PX9	1271 aa		6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	GPRC5C	Q9NQ84	441 aa		6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	ZNF652	Q9Y2D9	606 aa		6.11	□□□□□ -1.43
PCM1-223	ENST00000524356	TOP2A	P11388	1531 aa	Known RBP	6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	LRG1	P02750	347 aa		6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	ACO1	P21399	889 aa	Known RBP	6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	ZNF326	Q5BKZ1	582 aa	Known RBP	6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	MROH9	Q5TGP6	573 aa		6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	TMC5	Q6UXY8	1006 aa		6.1	□□□□□ -1.43
PCM1-223	ENST00000524356		Q6ZUG5	572 aa		6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	COPS5	Q92905	334 aa		6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	FGD4	Q96M96	766 aa		6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	RBPJL	Q9UBG7	517 aa		6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	TMEFF2	Q9UIK5	374 aa	Predicted RBP	6.1	□□□□□ -1.43
PCM1-223	ENST00000524356	EPHX1	P07099	455 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356	ADH4	P08319	380 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356	IMPDH2	P12268	514 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356	CSF2RB	P32927	897 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356	COL10A1	Q03692	680 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356	ZNF662	Q6ZS27	426 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356	GPR155	Q7Z3F1	870 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356		Q8N1Y9	231 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356	GBP3	Q9H0R5	595 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356	GGT7	Q9UJ14	662 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356		X6R8D5	127 aa		6.09	□□□□□ -1.43
PCM1-223	ENST00000524356	TCRBV5S2	A0A599	114 aa		6.08	□□□□□ -1.44
PCM1-223	ENST00000524356	PHF19	Q5T6S3	580 aa		6.08	□□□□□ -1.44
PCM1-223	ENST00000524356	HEATR6	Q6AI08	1181 aa	Known RBP	6.08	□□□□□ -1.44
PCM1-223	ENST00000524356	NLRP10	Q86W26	655 aa		6.08	□□□□□ -1.44
PCM1-223	ENST00000524356	NEIL1	Q96FI4	390 aa	Predicted RBP	6.08	□□□□□ -1.44
PCM1-223	ENST00000524356	DNMBP	Q6XZF7	1577 aa		6.08	□□□□□ -1.44
PCM1-223	ENST00000524356	ABCC8	Q09428	1581 aa		6.07	□□□□□ -1.44
PCM1-223	ENST00000524356	TUBA3C	Q13748	450 aa		6.07	□□□□□ -1.44
PCM1-223	ENST00000524356	TUBA3E	Q6PEY2	450 aa		6.07	□□□□□ -1.44
PCM1-223	ENST00000524356	DPH6	Q7L8W6	267 aa		6.07	□□□□□ -1.44
PCM1-223	ENST00000524356	ADAT2	Q7Z6V5	191 aa	Known RBP	6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms