RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 GLRX3O76003 335 aaKnown RBP8.01□□□□□ -1.13
SKP1-213ENST00000524288 CYBBP04839 570 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 FLT3P36888 993 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 KCNAB2Q13303 367 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 PLEKHN1Q494U1 663 aaPredicted RBP8.01□□□□□ -1.13
SKP1-213ENST00000524288 E4F1Q66K89 784 aaPredicted RBP8.01□□□□□ -1.13
SKP1-213ENST00000524288 ZC3H14Q6PJT7 736 aaKnown RBP8.01□□□□□ -1.13
SKP1-213ENST00000524288 PAQR3Q6TCH7 311 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 UBE2R2Q712K3 238 aaPredicted RBP8.01□□□□□ -1.13
SKP1-213ENST00000524288 NXPE1Q8N323 547 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 IGSF22Q8N9C0 903 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 WNK4Q96J92 1243 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 CHAMP1Q96JM3 812 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 METTL14Q9HCE5 456 aaKnown RBP8.01□□□□□ -1.13
SKP1-213ENST00000524288 GPR27Q9NS67 375 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 BTG4Q9NY30 223 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 PCDHA5Q9Y5H7 936 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 NPFFR2Q9Y5X5 522 aa8.01□□□□□ -1.13
SKP1-213ENST00000524288 A0A1W2PQJ5 194 aa8□□□□□ -1.13
SKP1-213ENST00000524288 ZNF891A8MT65 544 aaPredicted RBP8□□□□□ -1.13
SKP1-213ENST00000524288 KRTAP9-7A8MTY7 169 aa8□□□□□ -1.13
SKP1-213ENST00000524288 M0R2C6 588 aa8□□□□□ -1.13
SKP1-213ENST00000524288 EYA4O95677 639 aa8□□□□□ -1.13
SKP1-213ENST00000524288 APPP05067 770 aa8□□□□□ -1.13
SKP1-213ENST00000524288 KCNA6P17658 529 aa8□□□□□ -1.13
SKP1-213ENST00000524288 POU3F2P20265 443 aaPredicted RBP8□□□□□ -1.13
SKP1-213ENST00000524288 ID4P47928 161 aa8□□□□□ -1.13
SKP1-213ENST00000524288 AFF3P51826 1226 aaKnown RBP8□□□□□ -1.13
SKP1-213ENST00000524288 ODR4Q5SWX8 454 aa8□□□□□ -1.13
SKP1-213ENST00000524288 LBX2Q6XYB7 198 aa8□□□□□ -1.13
SKP1-213ENST00000524288 IGDCC3Q8IVU1 814 aa8□□□□□ -1.13
SKP1-213ENST00000524288 KCNC2Q96PR1 638 aa8□□□□□ -1.13
SKP1-213ENST00000524288 KRTAP4-9Q9BYQ8 210 aa8□□□□□ -1.13
SKP1-213ENST00000524288 ZCCHC4Q9H5U6 513 aa8□□□□□ -1.13
SKP1-213ENST00000524288 IRS2Q9Y4H2 1338 aa8□□□□□ -1.13
SKP1-213ENST00000524288 KATNA1O75449 491 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 PARNO95453 639 aaKnown RBP7.99□□□□□ -1.13
SKP1-213ENST00000524288 DBHP09172 617 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 MSL3P1P0C860 447 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 BMP7P18075 431 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 DNM2P50570 870 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 GUCY2FP51841 1108 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 CTSWP56202 376 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 CAP1Q01518 475 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 CNKSR3Q6P9H4 555 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 RSPO2Q6UXX9 243 aaPredicted RBP7.99□□□□□ -1.13
SKP1-213ENST00000524288 MARCH10Q8NA82 808 aaPredicted RBP7.99□□□□□ -1.13
SKP1-213ENST00000524288 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.99□□□□□ -1.13
SKP1-213ENST00000524288 JDP2Q8WYK2 163 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 ZFYVE21Q9BQ24 234 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 ALG1Q9BT22 464 aa7.99□□□□□ -1.13
SKP1-213ENST00000524288 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.99□□□□□ -1.132e-6■■■□□ 18.4
SKP1-213ENST00000524288 EPB41L4AQ9HCS5 686 aaPredicted RBP7.99□□□□□ -1.13
SKP1-213ENST00000524288 ARVCFO00192 962 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 PFKLP17858 780 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 HOXA5P20719 270 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 TMPRSS15P98073 1019 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 TARBP2Q15633 366 aaKnown RBP7.98□□□□□ -1.13
SKP1-213ENST00000524288 DDX53Q86TM3 631 aaKnown RBP7.98□□□□□ -1.13
SKP1-213ENST00000524288 FAM129CQ86XR2 697 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 TMEFF1Q8IYR6 380 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 CISD2Q8N5K1 135 aaKnown RBP7.98□□□□□ -1.13
SKP1-213ENST00000524288 PCDH19Q8TAB3 1148 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 WDR66Q8TBY9 1149 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 PANK1Q8TE04 598 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 USP7Q93009 1102 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 CEP89Q96ST8 783 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 MMP19Q99542 508 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 SMAD5Q99717 465 aaKnown RBP7.98□□□□□ -1.13
SKP1-213ENST00000524288 IPPKQ9H8X2 491 aa7.98□□□□□ -1.13
SKP1-213ENST00000524288 TYW1Q9NV66 732 aaKnown RBP7.98□□□□□ -1.13
SKP1-213ENST00000524288 B4E1Z4 1266 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 TRIM13O60858 407 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 SOD2P04179 222 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 CKMP06732 381 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 PYGMP11217 842 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 BCL6P41182 706 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 PAK1Q13153 545 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 STAT4Q14765 748 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 BICRALQ6AI39 1079 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 RAVER1Q8IY67 606 aaKnown RBP7.97□□□□□ -1.13
SKP1-213ENST00000524288 COG1Q8WTW3 980 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 KCNJ15Q99712 375 aa7.97□□□□□ -1.13
SKP1-213ENST00000524288 TRBV23OR9-2A0A075B6M9 112 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 CCDC66A2RUB6 948 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 C7orf72A4D263 438 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 NEMP1O14524 444 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 BUB1BO60566 1050 aaPredicted RBP7.96□□□□□ -1.14
SKP1-213ENST00000524288 SASH1O94885 1247 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 CPEP16870 476 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 NAT1P18440 290 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 IGFBP6P24592 240 aaPredicted RBP7.96□□□□□ -1.14
SKP1-213ENST00000524288 DHCR24Q15392 516 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 TESK1Q15569 626 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 KIZQ2M2Z5 673 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 IQCEQ6IPM2 695 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 SP8Q8IXZ3 490 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 OR2W6PQ8NHA6 318 aa7.96□□□□□ -1.14
SKP1-213ENST00000524288 GPR101Q96P66 508 aaPredicted RBP7.96□□□□□ -1.14
SKP1-213ENST00000524288 WASHC2CQ9Y4E1 1318 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms