RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 CEP89Q96ST8 783 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 ORAI3Q9BRQ5 295 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 YIPF4Q9BSR8 244 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 BOCQ9BWV1 1114 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 SP110Q9HB58 689 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 HOMER2Q9NSB8 354 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 PCDHB4Q9Y5E5 795 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 ATP23Q9Y6H3 246 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 ALG1L2C9J202 215 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 TRAF5O00463 557 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 SLC27A2O14975 620 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 NKRFO15226 690 aaKnown RBP eCLIP5.38□□□□□ -1.551e-7■□□□□ 8.2
SKP1-212ENST00000523966 GLI1P08151 1106 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 ERVFRD-1P60508 538 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 SEPT7Q16181 437 aaKnown RBP5.38□□□□□ -1.55
SKP1-212ENST00000523966 EMC4Q5J8M3 183 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 ZSWIM9Q86XI8 627 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 AFAP1L2Q8N4X5 818 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 UHMK1Q8TAS1 419 aaKnown RBP5.38□□□□□ -1.55
SKP1-212ENST00000523966 SHISA4Q96DD7 197 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 DDX11Q96FC9 970 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 INTS4Q96HW7 963 aaKnown RBP5.38□□□□□ -1.55
SKP1-212ENST00000523966 GPR101Q96P66 508 aaPredicted RBP5.38□□□□□ -1.55
SKP1-212ENST00000523966 PCIF1Q9H4Z3 704 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 TNFRSF12AQ9NP84 129 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 THG1LQ9NWX6 298 aaKnown RBP5.38□□□□□ -1.55
SKP1-212ENST00000523966 MYOTQ9UBF9 498 aa5.38□□□□□ -1.55
SKP1-212ENST00000523966 OAS3Q9Y6K5 1087 aaKnown RBP5.38□□□□□ -1.55
SKP1-212ENST00000523966 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 SCDO00767 359 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 FKBP9O95302 570 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 IRF9Q00978 393 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 FIGNQ5HY92 759 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 FYB2Q5VWT5 728 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 RNF219Q5W0B1 726 aaPredicted RBP5.37□□□□□ -1.55
SKP1-212ENST00000523966 BTBD8Q5XKL5 378 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 ZC3H14Q6PJT7 736 aaKnown RBP5.37□□□□□ -1.55
SKP1-212ENST00000523966 KCTD1Q719H9 257 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 FKBP9P1Q75LS8 142 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 STRA8Q7Z7C7 330 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 PRPF38AQ8NAV1 312 aaKnown RBP5.37□□□□□ -1.55
SKP1-212ENST00000523966 RXFP1Q9HBX9 757 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 RIC8BQ9NVN3 520 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 FBLN5Q9UBX5 448 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 PALD1Q9ULE6 856 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 SRPK3Q9UPE1 567 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 APOBEC2Q9Y235 224 aaKnown RBP5.37□□□□□ -1.55
SKP1-212ENST00000523966 ZNF652Q9Y2D9 606 aa5.37□□□□□ -1.55
SKP1-212ENST00000523966 FAM83GA6ND36 823 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 ZNF891A8MT65 544 aaPredicted RBP5.36□□□□□ -1.55
SKP1-212ENST00000523966 KCNK3O14649 394 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 SGSM2O43147 1006 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 RAB11FIP3O75154 756 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 TADA3O75528 432 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 SDHBP21912 280 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 GJA4P35212 333 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 LSSP48449 732 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 MAPKAPK2P49137 400 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 IRAK1P51617 712 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 PRR5P85299 388 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 FAPQ12884 760 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 TUSC3Q13454 348 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 STAT4Q14765 748 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 SKOR2Q2VWA4 1001 aaPredicted RBP5.36□□□□□ -1.55
SKP1-212ENST00000523966 ATP13A4Q4VNC1 1196 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 HABP4Q5JVS0 413 aaKnown RBP5.36□□□□□ -1.55
SKP1-212ENST00000523966 IQSEC1Q6DN90 963 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 TMEM132EQ6IEE7 984 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 HHIPL2Q6UWX4 724 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.36□□□□□ -1.55
SKP1-212ENST00000523966 FERMT3Q86UX7 667 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 IRF2BP1Q8IU81 584 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 SMC1BQ8NDV3 1235 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 CHTF18Q8WVB6 975 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 CD244Q9BZW8 370 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 SMURF1Q9HCE7 757 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 ASH2LQ9UBL3 628 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 SIT1Q9Y3P8 196 aa5.36□□□□□ -1.55
SKP1-212ENST00000523966 MAN2B1O00754 1011 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 CLASP2O75122 1294 aaKnown RBP5.35□□□□□ -1.55
SKP1-212ENST00000523966 ULK1O75385 1050 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 EFEMP2O95967 443 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 AMY2AP04746 511 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 ATP2A2P16615 1042 aaKnown RBP5.35□□□□□ -1.55
SKP1-212ENST00000523966 JUNBP17275 347 aaPredicted RBP5.35□□□□□ -1.55
SKP1-212ENST00000523966 AMY2BP19961 511 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 PMLP29590 882 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 MECP2P51608 486 aaKnown RBP5.35□□□□□ -1.55
SKP1-212ENST00000523966 GUCY2FP51841 1108 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 KIF11P52732 1056 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 TMPRSS15P98073 1019 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 DSG1Q02413 1049 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 FAM50AQ14320 339 aaKnown RBP5.35□□□□□ -1.55
SKP1-212ENST00000523966 TMEM132BQ14DG7 1078 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 RGL3Q3MIN7 710 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 RPTNQ6XPR3 784 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 OTOP1Q7RTM1 612 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 SPATS2Q86XZ4 545 aaKnown RBP5.35□□□□□ -1.55
SKP1-212ENST00000523966 FAM168AQ92567 244 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 ALG3Q92685 438 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms