RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 CTSHP09668 335 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 PDHBP11177 359 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 EIF2AK2P19525 551 aaKnown RBP10.89□□□□□ -0.67
PTPN12-216ENST00000523952 LTBRP36941 435 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 HNRNPUQ00839 825 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTPN12-216ENST00000523952 HYAL1Q12794 435 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 COL19A1Q14993 1142 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 TRIM71Q2Q1W2 868 aaKnown RBP10.89□□□□□ -0.67
PTPN12-216ENST00000523952 SERINC5Q86VE9 423 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 RGS22Q8NE09 1264 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 APBB2Q92870 758 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 WNT8BQ93098 351 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 EMID1Q96A84 441 aaPredicted RBP10.89□□□□□ -0.67
PTPN12-216ENST00000523952 SPATA33Q96N06 139 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 TAAR1Q96RJ0 339 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 ZBTB40Q9NUA8 1239 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 DDX41Q9UJV9 622 aaKnown RBP10.89□□□□□ -0.67
PTPN12-216ENST00000523952 ZFHX2Q9C0A1 2572 aaPredicted RBP10.89□□□□□ -0.67
PTPN12-216ENST00000523952 CCDC171Q6TFL3 1326 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 HAS3O00219 553 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 ORC4O43929 436 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 PPFIA4O75335 1185 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 EIF3JO75822 258 aaKnown RBP10.88□□□□□ -0.67
PTPN12-216ENST00000523952 GNAT1P11488 350 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 MYCLP12524 364 aaPredicted RBP10.88□□□□□ -0.67
PTPN12-216ENST00000523952 ZXDAP98168 799 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 DLX2Q07687 328 aaPredicted RBP10.88□□□□□ -0.67
PTPN12-216ENST00000523952 ZNF543Q08ER8 600 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 CTC1Q2NKJ3 1217 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 KCNV1Q6PIU1 500 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 ZBTB33Q86T24 672 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 MLXIPQ9HAP2 919 aa10.88□□□□□ -0.67
PTPN12-216ENST00000523952 BAZ2BQ9UIF8 2168 aaKnown RBP10.88□□□□□ -0.67
PTPN12-216ENST00000523952 ADGRA3Q8IWK6 1321 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 NOP56O00567 594 aaKnown RBP10.87□□□□□ -0.67
PTPN12-216ENST00000523952 GRM6O15303 877 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 CAND2O75155 1236 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 KDM4AO75164 1064 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 TBX10O75333 385 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 BMPR1AP36894 532 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 TCF15Q12870 199 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 BTG3Q14201 252 aaPredicted RBP10.87□□□□□ -0.67
PTPN12-216ENST00000523952 CDC37Q16543 378 aaPredicted RBP10.87□□□□□ -0.67
PTPN12-216ENST00000523952 ZMYM1Q5SVZ6 1142 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 GPATCH4Q5T3I0 446 aaKnown RBP10.87□□□□□ -0.67
PTPN12-216ENST00000523952 MIER1Q8N108 512 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 SYTL5Q8TDW5 730 aaPredicted RBP10.87□□□□□ -0.67
PTPN12-216ENST00000523952 MAF1Q9H063 256 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 MRPL11Q9Y3B7 192 aaKnown RBP10.87□□□□□ -0.67
PTPN12-216ENST00000523952 EVPLQ92817 2033 aa10.87□□□□□ -0.67
PTPN12-216ENST00000523952 C5orf67F2Z3F1 127 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 H3BRB1 525 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 LINC01565O15544 149 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 GGPS1O95749 300 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 CFBP00751 764 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 NR3C2P08235 984 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 GOLGA8HP0CJ92 632 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 HSPD1P10809 573 aaKnown RBP10.86□□□□□ -0.67
PTPN12-216ENST00000523952 GTF2F1P35269 517 aaKnown RBP eCLIP10.86□□□□□ -0.678e-20■■■■■ 28.5
PTPN12-216ENST00000523952 SIGLEC14Q08ET2 396 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 TBC1D5Q92609 795 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 RPGRIP1Q96KN7 1286 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 TTC14Q96N46 770 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 TUT1Q9H6E5 874 aaKnown RBP10.86□□□□□ -0.67
PTPN12-216ENST00000523952 ALG13Q9NP73 1137 aaKnown RBP10.86□□□□□ -0.67
PTPN12-216ENST00000523952 TCP11L1Q9NUJ3 509 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 ANAPC4Q9UJX5 808 aa10.86□□□□□ -0.67
PTPN12-216ENST00000523952 PTPRZ1P23471 2315 aaPredicted RBP10.86□□□□□ -0.67
PTPN12-216ENST00000523952 TTC41PQ6P2S7 1318 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.85□□□□□ -0.67
PTPN12-216ENST00000523952 TREHO43280 583 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 MMP1P03956 469 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 SMIM10L2AP0DMW4 78 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 SMIM10L2BP0DMW5 78 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 NOVP48745 357 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 ADAM15Q13444 863 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 HSDL1Q3SXM5 330 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 CELF3Q5SZQ8 465 aaKnown RBP10.85□□□□□ -0.67
PTPN12-216ENST00000523952 MYSM1Q5VVJ2 828 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 MFSD6Q6ZSS7 791 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 PLVAPQ9BX97 442 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 UBA5Q9GZZ9 404 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 PXMP2Q9NR77 195 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 COL20A1Q9P218 1284 aa10.85□□□□□ -0.67
PTPN12-216ENST00000523952 ZBTB47Q9UFB7 747 aaPredicted RBP10.85□□□□□ -0.67
PTPN12-216ENST00000523952 FAM186AA6NE01 2351 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 H0Y858 1186 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 RBAK-RBAKDNI3L0D1 243 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 AVPR2P30518 371 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 VCPP55072 806 aaKnown RBP10.84□□□□□ -0.67
PTPN12-216ENST00000523952 RRP1P56182 461 aaKnown RBP10.84□□□□□ -0.67
PTPN12-216ENST00000523952 HIC1Q14526 733 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 RBM23Q86U06 439 aaKnown RBP10.84□□□□□ -0.67
PTPN12-216ENST00000523952 MICAL1Q8TDZ2 1067 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 CPVLQ9H3G5 476 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 VAT1LQ9HCJ6 419 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 TLR9Q9NR96 1032 aa10.84□□□□□ -0.67
PTPN12-216ENST00000523952 ZNF215Q9UL58 517 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms