RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 NECTIN1Q15223 517 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 RTN1Q16799 776 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 PPP1R18Q6NYC8 613 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 USP17L6PQ6QN14 398 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 CYFIP1Q7L576 1253 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 SRBD1Q8N5C6 995 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 DHX38Q92620 1227 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 ATP6V0A1Q93050 837 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 GPRASP2Q96D09 838 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 VWCEQ96DN2 955 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 NEK1Q96PY6 1258 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 SENP7Q9BQF6 1050 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 LRRC2Q9BYS8 371 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 TUT1Q9H6E5 874 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 RTEL1Q9NZ71 1219 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 COG5Q9UP83 839 aa10.18□□□□□ -0.78
CTNNA1-240ENST00000523912 hCG_1984214I3L0E3 225 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 MEIS2O14770 477 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 ZBTB43O43298 467 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 TLL1O43897 1013 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 CXCL10P02778 98 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 SMIM10L2AP0DMW4 78 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 SMIM10L2BP0DMW5 78 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 PLA2G5P39877 138 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 THPOP40225 353 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 RCAN1P53805 252 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 MRPS9P82933 396 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 SP2Q02086 613 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 SP4Q02446 784 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 IKBKEQ14164 716 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 CCDC85BQ15834 202 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 DHX32Q7L7V1 743 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 SERINC5Q86VE9 423 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 RAB11FIP4Q86YS3 637 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 ZNF713Q8N859 430 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 GPKOWQ92917 476 aaPredicted RBP eCLIP10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 ZFP91Q96JP5 570 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 CTAGE1Q96RT6 745 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 GPR20Q99678 358 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 C16orf70Q9BSU1 422 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 GLT8D2Q9H1C3 349 aa10.17□□□□□ -0.78
CTNNA1-240ENST00000523912 CHD9Q3L8U1 2897 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 PRUNE2Q8WUY3 3088 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 BDP1A6H8Y1 2624 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 CCDC196A0A1B0GTZ2 297 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 GOLGA8AA7E2F4 631 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 GOLGA8BA8MQT2 603 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 RSPH10B2B2RC85 870 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 LGR5O75473 907 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 AMHP03971 560 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 RSPH10BP0C881 870 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 MYOGP15173 224 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 ADCY7P51828 1080 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 NAPAP54920 295 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 WDR5P61964 334 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 MTMR1Q13613 665 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 TRIM71Q2Q1W2 868 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 UTP14CQ5TAP6 766 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 APOA5Q6Q788 366 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 MICALL1Q8N3F8 863 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 CCDC82Q8N4S0 544 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 CCDC136Q96JN2 1154 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 NAP1L2Q9ULW6 460 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 MTCH2Q9Y6C9 303 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 PRRC2BQ5JSZ5 2229 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 TANC1Q9C0D5 1861 aa10.16□□□□□ -0.78
CTNNA1-240ENST00000523912 KIAA1217Q5T5P2 1943 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 GBF1Q92538 1859 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 CNTNAP5Q8WYK1 1306 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 hCG_1642624A0A1W2PR95 340 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 MAFGO15525 162 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 NBNO60934 754 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 FOSP01100 380 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 ARHGAP4P98171 946 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 ZNF200P98182 395 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 SEMA3FQ13275 785 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 SKIV2LQ15477 1246 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 UBE2SQ16763 222 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 TSGA10IPQ3SY00 556 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 ZNF618Q5T7W0 954 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 TAF2Q6P1X5 1199 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 RSPH3Q86UC2 560 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 ARNTL2Q8WYA1 636 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 SEPT8Q92599 483 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 TNPO1Q92973 898 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 FAM122AQ96E09 287 aa10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 JPH1Q9HDC5 661 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-240ENST00000523912 VCANP13611 3396 aa10.15□□□□□ -0.79
CTNNA1-240ENST00000523912 SPTBN5Q9NRC6 3674 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 NRCAMQ92823 1304 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 KLF18A0A0U1RQI7 1052 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 REC8O95072 547 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 GJB5O95377 273 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 RPLP2P05387 115 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 CTSHP09668 335 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 KCNA2P16389 499 aa10.14□□□□□ -0.79
CTNNA1-240ENST00000523912 ITGB5P18084 799 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms