RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 PDGFDQ9GZP0 370 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-207ENST00000523588 GOLGA2P5Q9HBQ8 144 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 CATSPERZQ9NTU4 200 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 CNOT6Q9ULM6 557 aaKnown RBP8.02□□□□□ -1.13
CPNE3-207ENST00000523588 KCTD3Q9Y597 815 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 ZNF561-AS1K7EIQ3 104 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 LTFP02788 710 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 PDE6AP16499 860 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 PI3P19957 117 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 LIMS1P48059 325 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 EPHA5P54756 1037 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 LACTBP83111 547 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-207ENST00000523588 FOXO4P98177 505 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 GPR19Q15760 415 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 CR1LQ2VPA4 569 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 ARHGAP36Q6ZRI8 547 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 OSTM1Q86WC4 334 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 FAM129CQ86XR2 697 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 CELF4Q9BZC1 486 aaKnown RBP8.01□□□□□ -1.13
CPNE3-207ENST00000523588 TMA7Q9Y2S6 64 aaKnown RBP8.01□□□□□ -1.13
CPNE3-207ENST00000523588 COQ6Q9Y2Z9 468 aa8.01□□□□□ -1.13
CPNE3-207ENST00000523588 GSTA4O15217 222 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 STAT5AP42229 794 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 DNM2P50570 870 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 JAM2P57087 298 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 ST5P78524 1137 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 TUSC3Q13454 348 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 PLEKHG4Q58EX7 1191 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 FAM47CQ5HY64 1035 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 TRIM48Q8IWZ4 208 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 TTLL11Q8NHH1 800 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 SMARCC2Q8TAQ2 1214 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 DTLQ9NZJ0 730 aa8□□□□□ -1.13
CPNE3-207ENST00000523588 TNPO3Q9Y5L0 923 aaKnown RBP8□□□□□ -1.13
CPNE3-207ENST00000523588 DBX1A6NMT0 343 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 MAN2B1O00754 1011 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 LRG1P02750 347 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 ASLP04424 464 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 ZNF460Q14592 562 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 CRY1Q16526 586 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 SDE2Q6IQ49 451 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 KCTD1Q719H9 257 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 OVCH1Q7RTY7 1134 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 IGSF22Q8N9C0 903 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 DACT3Q96B18 629 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-207ENST00000523588 TOE1Q96GM8 510 aaKnown RBP7.99□□□□□ -1.13
CPNE3-207ENST00000523588 NOX5Q96PH1 765 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 FEZ1Q99689 392 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 SYT3Q9BQG1 590 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 CD244Q9BZW8 370 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 SMURF1Q9HCE7 757 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 SRPK3Q9UPE1 567 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 FAN1Q9Y2M0 1017 aa7.99□□□□□ -1.13
CPNE3-207ENST00000523588 NPTXRO95502 500 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
CPNE3-207ENST00000523588 IGFALSP35858 605 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 HTRA3P83110 453 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 GRIN1Q05586 938 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 ZNF385BQ569K4 471 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 DALRD3Q5D0E6 543 aaKnown RBP7.98□□□□□ -1.13
CPNE3-207ENST00000523588 CNKSR3Q6P9H4 555 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 CD300LDQ6UXZ3 194 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-207ENST00000523588 PTRH1Q86Y79 214 aaKnown RBP7.98□□□□□ -1.13
CPNE3-207ENST00000523588 C1QL4Q86Z23 238 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 CISD2Q8N5K1 135 aaKnown RBP7.98□□□□□ -1.13
CPNE3-207ENST00000523588 NINJ1Q92982 152 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 DDX11Q96FC9 970 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 INTS7Q9NVH2 962 aaKnown RBP7.98□□□□□ -1.13
CPNE3-207ENST00000523588 HSPBP1Q9NZL4 362 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 NUB1Q9Y5A7 615 aa7.98□□□□□ -1.13
CPNE3-207ENST00000523588 FAM83GA6ND36 823 aa7.97□□□□□ -1.13
CPNE3-207ENST00000523588 OPA1O60313 960 aa7.97□□□□□ -1.13
CPNE3-207ENST00000523588 APPP05067 770 aa7.97□□□□□ -1.13
CPNE3-207ENST00000523588 CYP2C8P10632 490 aa7.97□□□□□ -1.13
CPNE3-207ENST00000523588 KRT15P19012 456 aa7.97□□□□□ -1.13
CPNE3-207ENST00000523588 CFPP27918 469 aa7.97□□□□□ -1.13
CPNE3-207ENST00000523588 ZCCHC8Q6NZY4 707 aaKnown RBP7.97□□□□□ -1.13
CPNE3-207ENST00000523588 TEPPQ6URK8 271 aa7.97□□□□□ -1.13
CPNE3-207ENST00000523588 GORASP1Q9BQQ3 440 aa7.97□□□□□ -1.13
CPNE3-207ENST00000523588 MAGEC2Q9UBF1 373 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-207ENST00000523588 WASF3Q9UPY6 502 aa7.97□□□□□ -1.13
CPNE3-207ENST00000523588 B4E1Z4 1266 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 ACOT7O00154 380 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 RFXAPO00287 272 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 HSD3B2P26439 372 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 MECP2P51608 486 aaKnown RBP7.96□□□□□ -1.14
CPNE3-207ENST00000523588 TMEM177Q53S58 311 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 FIGNQ5HY92 759 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 HHIPL2Q6UWX4 724 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 ZC3H18Q86VM9 953 aaKnown RBP7.96□□□□□ -1.14
CPNE3-207ENST00000523588 NLGN4XQ8N0W4 816 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 LINC00482Q8N8I6 264 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 FNIP1Q8TF40 1166 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 PWWP2AQ96N64 755 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 YIPF4Q9BSR8 244 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 IRF2BPLQ9H1B7 796 aa7.96□□□□□ -1.14
CPNE3-207ENST00000523588 NGRNQ9NPE2 291 aaKnown RBP7.96□□□□□ -1.14
CPNE3-207ENST00000523588 FAM90A27PA6NNH2 459 aa7.95□□□□□ -1.14
CPNE3-207ENST00000523588 KCNK3O14649 394 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms