RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 PRR5P85299 388 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 NFIXQ14938 502 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 ABHD17CQ6PCB6 329 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 OTOP3Q7RTS5 596 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 TMC6Q7Z403 805 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 NIM1KQ8IY84 436 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 CXorf38Q8TB03 319 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 MZB1Q8WU39 189 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 SIGLEC10Q96LC7 697 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 KCNJ15Q99712 375 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 AP5M1Q9H0R1 490 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 INTS7Q9NVH2 962 aaKnown RBP6.74□□□□□ -1.33
PCM1-219ENST00000523540 ZNF652Q9Y2D9 606 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 PCDHA5Q9Y5H7 936 aa6.74□□□□□ -1.33
PCM1-219ENST00000523540 TNPO3Q9Y5L0 923 aaKnown RBP6.74□□□□□ -1.33
PCM1-219ENST00000523540 TADA3O75528 432 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 ASLP04424 464 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 PFKLP17858 780 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 TCERG1LQ5VWI1 586 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 C16orf59Q7L2K0 433 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 LDHDQ86WU2 507 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 MIB1Q86YT6 1006 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 ZC3H7AQ8IWR0 971 aaKnown RBP6.73□□□□□ -1.33
PCM1-219ENST00000523540 DHX37Q8IY37 1157 aaKnown RBP6.73□□□□□ -1.33
PCM1-219ENST00000523540 PIP4K2CQ8TBX8 421 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 PHOSPHO1Q8TCT1 267 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 FBXW5Q969U6 566 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 SLC6A20Q9NP91 592 aa6.73□□□□□ -1.33
PCM1-219ENST00000523540 NGRNQ9NPE2 291 aaKnown RBP6.73□□□□□ -1.33
PCM1-219ENST00000523540 MAGEC2Q9UBF1 373 aaPredicted RBP6.73□□□□□ -1.33
PCM1-219ENST00000523540 CNOT6Q9ULM6 557 aaKnown RBP6.73□□□□□ -1.33
PCM1-219ENST00000523540 FAM83GA6ND36 823 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 RFXAPO00287 272 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 HGSO14964 777 aaPredicted RBP6.72□□□□□ -1.33
PCM1-219ENST00000523540 MAFKO60675 156 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 PYGMP11217 842 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 COL6A2P12110 1019 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 IGFALSP35858 605 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 CDR1P51861 262 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 NFKB2Q00653 900 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 ZNF460Q14592 562 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 SKOR2Q2VWA4 1001 aaPredicted RBP6.72□□□□□ -1.33
PCM1-219ENST00000523540 TM4SF20Q53R12 229 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 ZNF385BQ569K4 471 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 STEAP3Q658P3 488 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 TMEM132EQ6IEE7 984 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 TMEM151BQ8IW70 566 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 CELF4Q9BZC1 486 aaKnown RBP6.72□□□□□ -1.33
PCM1-219ENST00000523540 XYLT2Q9H1B5 865 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 HSPBP1Q9NZL4 362 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 DBR1Q9UK59 544 aaKnown RBP6.72□□□□□ -1.33
PCM1-219ENST00000523540 CBLCQ9ULV8 474 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 KCTD3Q9Y597 815 aa6.72□□□□□ -1.33
PCM1-219ENST00000523540 TCRBV5S4A2TA0A5A2 114 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 CCDC66A2RUB6 948 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 NKRFO15226 690 aaKnown RBP eCLIP6.71□□□□□ -1.34
PCM1-219ENST00000523540 OPA1O60313 960 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 CLSTN1O94985 981 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 NPTXRO95502 500 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 GNAT1P11488 350 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 NCAM1P13591 858 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 SPIRE1Q08AE8 756 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 IGDCC3Q8IVU1 814 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 MFSD3Q96ES6 412 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 PALD1Q9ULE6 856 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 COQ6Q9Y2Z9 468 aa6.71□□□□□ -1.34
PCM1-219ENST00000523540 B4E1Z4 1266 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 KRIT1O00522 736 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 GSTA4O15217 222 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 ST5P78524 1137 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 LACTBP83111 547 aaPredicted RBP6.7□□□□□ -1.34
PCM1-219ENST00000523540 FAM47CQ5HY64 1035 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 ZCCHC8Q6NZY4 707 aaKnown RBP6.7□□□□□ -1.34
PCM1-219ENST00000523540 OVCH1Q7RTY7 1134 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 MILR1Q7Z6M3 343 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 LRRTM3Q86VH5 581 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 IGSF22Q8N9C0 903 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 TTLL11Q8NHH1 800 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 UHMK1Q8TAS1 419 aaKnown RBP6.7□□□□□ -1.34
PCM1-219ENST00000523540 SH3RF2Q8TEC5 729 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 DDX1Q92499 740 aaKnown RBP6.7□□□□□ -1.34
PCM1-219ENST00000523540 SMOC1Q9H4F8 434 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 BCAS3Q9H6U6 928 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 CATSPERZQ9NTU4 200 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 NUB1Q9Y5A7 615 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 IRAK3Q9Y616 596 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 SHROOM4Q9ULL8 1493 aa6.7□□□□□ -1.34
PCM1-219ENST00000523540 SBNO2Q9Y2G9 1366 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 A0A087X0B3 334 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 TCRBV5S2A0A599 114 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 ZNF561-AS1K7EIQ3 104 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 AMY2AP04746 511 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 APPP05067 770 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 PDE6AP16499 860 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 AMY2BP19961 511 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 POU3F2P20265 443 aaPredicted RBP6.69□□□□□ -1.34
PCM1-219ENST00000523540 DNM2P50570 870 aa6.69□□□□□ -1.34
PCM1-219ENST00000523540 ZNF200P98182 395 aaPredicted RBP6.69□□□□□ -1.34
PCM1-219ENST00000523540 SSPNQ14714 243 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms