RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SP3Q02447 781 aa10.5□□□□□ -0.73
SDCBP-212ENST00000523483 IQUBQ8NA54 791 aa10.5□□□□□ -0.73
SDCBP-212ENST00000523483 ERMNQ8TAM6 284 aa10.5□□□□□ -0.73
SDCBP-212ENST00000523483 UNC45AQ9H3U1 944 aa10.5□□□□□ -0.73
SDCBP-212ENST00000523483 ZHX3Q9H4I2 956 aa10.5□□□□□ -0.73
SDCBP-212ENST00000523483 MLXIPQ9HAP2 919 aa10.5□□□□□ -0.73
SDCBP-212ENST00000523483 AGO4Q9HCK5 861 aaKnown RBP10.5□□□□□ -0.73
SDCBP-212ENST00000523483 SLC5A4Q9NY91 659 aa10.5□□□□□ -0.73
SDCBP-212ENST00000523483 ORC2Q13416 577 aaPredicted RBP10.49□□□□□ -0.73
SDCBP-212ENST00000523483 TMEM63BQ5T3F8 832 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 SAMD3Q8N6K7 520 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 ZNF579Q8NAF0 562 aaKnown RBP10.49□□□□□ -0.73
SDCBP-212ENST00000523483 RNF214Q8ND24 703 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 NPLOC4Q8TAT6 608 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 PIGOQ8TEQ8 1089 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 IWS1Q96ST2 819 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 POLD4Q9HCU8 107 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 DISC1Q9NRI5 854 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 HTTP42858 3142 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 CNGA1P29973 690 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 FCGRTP55899 365 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 IGSF22Q8N9C0 903 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 ENGASEQ8NFI3 743 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 CD99L2Q8TCZ2 262 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 COPS5Q92905 334 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 CCDC34Q96HJ3 373 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 TELO2Q9Y4R8 837 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 ASB14A6NK59 587 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 NOP56O00567 594 aaKnown RBP10.49□□□□□ -0.73
SDCBP-212ENST00000523483 GGPS1O95749 300 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 TXNP10599 105 aaKnown RBP10.49□□□□□ -0.73
SDCBP-212ENST00000523483 FXR2P51116 673 aaKnown RBP eCLIP10.49□□□□□ -0.73
SDCBP-212ENST00000523483 LACTBP83111 547 aaPredicted RBP10.49□□□□□ -0.73
SDCBP-212ENST00000523483 HAUS3Q68CZ6 603 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 KRBA2Q6ZNG9 492 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 OTOP1Q7RTM1 612 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 DYDC2Q96IM9 177 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 MAML3Q96JK9 1138 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 AK8Q96MA6 479 aa10.49□□□□□ -0.73
SDCBP-212ENST00000523483 INPP4AQ96PE3 977 aaPredicted RBP10.49□□□□□ -0.73
SDCBP-212ENST00000523483 ZCCHC17Q9NP64 241 aaKnown RBP10.49□□□□□ -0.73
SDCBP-212ENST00000523483 E9PMD0 336 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 KRT18P05783 430 aaKnown RBP10.48□□□□□ -0.73
SDCBP-212ENST00000523483 CTGFP29279 349 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 MAP2K2P36507 400 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 FLT3LGP49771 235 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 SP2Q02086 613 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 GHRHRQ02643 423 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 MAP2K5Q13163 448 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 GRB14Q14449 540 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 SASS6Q6UVJ0 657 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 EIF2AK1Q9BQI3 630 aaKnown RBP10.48□□□□□ -0.73
SDCBP-212ENST00000523483 CLSTN2Q9H4D0 955 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 JPH1Q9HDC5 661 aaPredicted RBP10.48□□□□□ -0.73
SDCBP-212ENST00000523483 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.48□□□□□ -0.73
SDCBP-212ENST00000523483 MYH15Q9Y2K3 1946 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 DNAJC25-GNG10A0A024R161 153 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 TBX3O15119 743 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 MED24O75448 989 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 IDEP14735 1019 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 ADCYAP1R1P41586 468 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 CACNB1Q02641 598 aaPredicted RBP10.48□□□□□ -0.73
SDCBP-212ENST00000523483 PRKCZQ05513 592 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 MAEAQ7L5Y9 396 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 DYMQ7RTS9 669 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 SLC5A5Q92911 643 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 GPRASP2Q96D09 838 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 CDHR1Q96JP9 859 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 FGD4Q96M96 766 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 MBOAT7Q96N66 472 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 TINF2Q9BSI4 451 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 GABRQQ9UN88 632 aa10.48□□□□□ -0.73
SDCBP-212ENST00000523483 ZBTB39O15060 712 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 PSMD10O75832 226 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 C1QTNF8P60827 252 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 SEMA3FQ13275 785 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 ECM1Q16610 540 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 UTP14CQ5TAP6 766 aaKnown RBP10.47□□□□□ -0.73
SDCBP-212ENST00000523483 CATSPER3Q86XQ3 398 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 LENG1Q96BZ8 264 aaPredicted RBP10.47□□□□□ -0.73
SDCBP-212ENST00000523483 MMTAG2Q9BU76 263 aaKnown RBP10.47□□□□□ -0.73
SDCBP-212ENST00000523483 TBC1D22BQ9NU19 505 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 HOOK1Q9UJC3 728 aaKnown RBP10.47□□□□□ -0.73
SDCBP-212ENST00000523483 HPSEQ9Y251 543 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 SLC15A5A6NIM6 579 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 ARIH2O95376 493 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 PRR29P0C7W0 189 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 HSPA6P17066 643 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 UBA1P22314 1058 aaKnown RBP10.47□□□□□ -0.73
SDCBP-212ENST00000523483 RGS2P41220 211 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 MCM6Q14566 821 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 ZNF792Q3KQV3 632 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 XRRA1Q6P2D8 792 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 TEX2Q8IWB9 1127 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 LXNQ9BS40 222 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 SLC9A2Q9UBY0 812 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 VAV3Q9UKW4 847 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 MCM3APO60318 1980 aa10.47□□□□□ -0.73
SDCBP-212ENST00000523483 TMEM150BA6NC51 233 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms