RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 ERO1BQ86YB8 467 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 WDR11Q9BZH6 1224 aa23.23■■□□□ 1.31
SQLE-206ENST00000523430 A0A0G2JLL6 359 aaPredicted RBP23.22■■□□□ 1.31
SQLE-206ENST00000523430 SPDYE5A6NIY4 337 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 POTEJP0CG39 1038 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 PLS1Q14651 629 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 PRRT2Q7Z6L0 340 aaPredicted RBP23.22■■□□□ 1.31
SQLE-206ENST00000523430 DNAJC19Q96DA6 116 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 RMDN3Q96TC7 470 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 LRRC27Q9C0I9 530 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 PXMP2Q9NR77 195 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 HOXC10Q9NYD6 342 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 RGL1Q9NZL6 768 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 PKD2L1Q9P0L9 805 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 PVALEFA0A1B0GWK0 134 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 IPO5O00410 1097 aaKnown RBP23.22■■□□□ 1.31
SQLE-206ENST00000523430 PEX10O60683 326 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 IDEP14735 1019 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 SLC12A3P55017 1021 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 TPD52L1Q16890 204 aaPredicted RBP23.22■■□□□ 1.31
SQLE-206ENST00000523430 GPBP1Q86WP2 473 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 UNC45AQ9H3U1 944 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 SLC39A2Q9NP94 309 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 KCNH7Q9NS40 1196 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 UBIAD1Q9Y5Z9 338 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 STK24Q9Y6E0 443 aa23.22■■□□□ 1.31
SQLE-206ENST00000523430 STIM1Q13586 685 aa23.21■■□□□ 1.31
SQLE-206ENST00000523430 TKFCQ3LXA3 575 aa23.21■■□□□ 1.31
SQLE-206ENST00000523430 APTXQ7Z2E3 356 aaKnown RBP23.21■■□□□ 1.31
SQLE-206ENST00000523430 CACTINQ8WUQ7 758 aaKnown RBP23.21■■□□□ 1.31
SQLE-206ENST00000523430 PDCD2LQ9BRP1 358 aa23.21■■□□□ 1.31
SQLE-206ENST00000523430 POLR3CQ9BUI4 534 aaPredicted RBP23.21■■□□□ 1.31
SQLE-206ENST00000523430 PYCARDQ9ULZ3 195 aa23.21■■□□□ 1.31
SQLE-206ENST00000523430 NPHP3-ACAD11A0A0J9YXS1 232 aa23.2■■□□□ 1.3
SQLE-206ENST00000523430 PSMA7O14818 248 aa23.2■■□□□ 1.3
SQLE-206ENST00000523430 BCRP11274 1271 aa23.2■■□□□ 1.3
SQLE-206ENST00000523430 CYP11B2P19099 503 aa23.2■■□□□ 1.3
SQLE-206ENST00000523430 TEKT3Q9BXF9 490 aa23.2■■□□□ 1.3
SQLE-206ENST00000523430 DDX39AO00148 427 aaKnown RBP23.19■■□□□ 1.3
SQLE-206ENST00000523430 MYCLP12524 364 aaPredicted RBP23.19■■□□□ 1.3
SQLE-206ENST00000523430 CLCN1P35523 988 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 CACNB1Q02641 598 aaPredicted RBP23.19■■□□□ 1.3
SQLE-206ENST00000523430 EHHADHQ08426 723 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 PABPC4Q13310 644 aaKnown RBP eCLIP23.19■■□□□ 1.32e-8■■■□□ 14.7
SQLE-206ENST00000523430 CTTNQ14247 550 aaKnown RBP23.19■■□□□ 1.3
SQLE-206ENST00000523430 ARHGEF16Q5VV41 709 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 B3GNT9Q6UX72 402 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 NIPA1Q7RTP0 329 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 ACAD9Q9H845 621 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 JADE2Q9NQC1 790 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 COASYQ13057 564 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 MTMR1Q13613 665 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
SQLE-206ENST00000523430 VSTM4Q8IW00 320 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 PROCA1Q8NCQ7 364 aaPredicted RBP23.19■■□□□ 1.3
SQLE-206ENST00000523430 OPTNQ96CV9 577 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 DYDC2Q96IM9 177 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 HSD17B14Q9BPX1 270 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 AGO4Q9HCK5 861 aaKnown RBP23.19■■□□□ 1.3
SQLE-206ENST00000523430 A1CFQ9NQ94 594 aaKnown RBP23.19■■□□□ 1.3
SQLE-206ENST00000523430 IMPACTQ9P2X3 320 aa23.19■■□□□ 1.3
SQLE-206ENST00000523430 LCTP09848 1927 aa23.18■■□□□ 1.3
SQLE-206ENST00000523430 RAD51AP2Q09MP3 1159 aa23.18■■□□□ 1.3
SQLE-206ENST00000523430 ITGB3BPQ13352 177 aaPredicted RBP23.18■■□□□ 1.3
SQLE-206ENST00000523430 ARSHQ5FYA8 562 aa23.18■■□□□ 1.3
SQLE-206ENST00000523430 TTI2Q6NXR4 508 aa23.18■■□□□ 1.3
SQLE-206ENST00000523430 C17orf53Q8N3J3 647 aaPredicted RBP23.18■■□□□ 1.3
SQLE-206ENST00000523430 GLIS3Q8NEA6 775 aa23.18■■□□□ 1.3
SQLE-206ENST00000523430 DHTKD1Q96HY7 919 aaPredicted RBP23.18■■□□□ 1.3
SQLE-206ENST00000523430 RIT2Q99578 217 aa23.18■■□□□ 1.3
SQLE-206ENST00000523430 CYP39A1Q9NYL5 469 aa23.18■■□□□ 1.3
SQLE-206ENST00000523430 DNM3Q9UQ16 869 aa23.18■■□□□ 1.3
SQLE-206ENST00000523430 TRAF5O00463 557 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 ZNF500O60304 480 aaPredicted RBP23.17■■□□□ 1.3
SQLE-206ENST00000523430 PPIL2Q13356 520 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 COBLL1Q53SF7 1204 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 LBX2Q6XYB7 198 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 TRIM47Q96LD4 638 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 TUFT1Q9NNX1 390 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 BTBD7Q9P203 1132 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 KCNH4Q9UQ05 1017 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 CLEC11AQ9Y240 323 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 A0A1B0GTH6 734 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 CXCL11O14625 94 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 SLITRK3O94933 977 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 MAP1SQ66K74 1059 aaPredicted RBP23.17■■□□□ 1.3
SQLE-206ENST00000523430 ARMC9Q7Z3E5 817 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 LRRC8AQ8IWT6 810 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 SYT2Q8N9I0 419 aaPredicted RBP23.17■■□□□ 1.3
SQLE-206ENST00000523430 P2RX5Q93086 422 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 GTPBP4Q9BZE4 634 aaKnown RBP23.17■■□□□ 1.3
SQLE-206ENST00000523430 PANK4Q9NVE7 773 aa23.17■■□□□ 1.3
SQLE-206ENST00000523430 WRAP73Q9P2S5 460 aaPredicted RBP23.17■■□□□ 1.3
SQLE-206ENST00000523430 DHX15O43143 795 aaKnown RBP23.16■■□□□ 1.3
SQLE-206ENST00000523430 HOXA7P31268 230 aaPredicted RBP23.16■■□□□ 1.3
SQLE-206ENST00000523430 TPH2Q8IWU9 490 aa23.16■■□□□ 1.3
SQLE-206ENST00000523430 BHMT2Q9H2M3 363 aa23.16■■□□□ 1.3
SQLE-206ENST00000523430 BMP2KQ9NSY1 1161 aaPredicted RBP23.16■■□□□ 1.3
SQLE-206ENST00000523430 CCNE1P24864 410 aa23.15■■□□□ 1.3
SQLE-206ENST00000523430 MOGSQ13724 837 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms