RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	MYO1E	Q12965	1108 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	USP4	Q13107	963 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	PAK2	Q13177	524 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	EIF4A2	Q14240	407 aa	Known RBP	4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	COL19A1	Q14993	1142 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	ANKRD20A2	Q5SQ80	823 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	ANKRD20A1	Q5TYW2	823 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	ANKRD20A3	Q5VUR7	823 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	DENND2C	Q68D51	928 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	SPECC1L	Q69YQ0	1117 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	TMTC1	Q8IUR5	882 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	CKAP2L	Q8IYA6	745 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	IQCK	Q8N0W5	287 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	LARGE2	Q8N3Y3	721 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	SCAI	Q8N9R8	606 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	TRIML1	Q8N9V2	468 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	CCDC63	Q8NA47	563 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	ASAP3	Q8TDY4	903 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	DQX1	Q8TE96	717 aa	Known RBP	4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	PLK2	Q9NYY3	685 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	DACH1	Q9UI36	760 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	TSKS	Q9UJT2	592 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	TRPC5	Q9UL62	973 aa	Predicted RBP	4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	VCAN	P13611	3396 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	SLIT3	O75094	1523 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	ATAD5	Q96QE3	1844 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288		A0A1B0GTH6	734 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288		F6X3S4	739 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	AP1G1	O43747	822 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	HNRNPCL1	O60812	293 aa	Known RBP	4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	NR1D1	P20393	614 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	TUBA1B	P68363	451 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	HPCA	P84074	193 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	PLCB3	Q01970	1234 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	MYL5	Q02045	173 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	KCNC4	Q03721	635 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	NR1I3	Q14994	352 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	SUZ12	Q15022	739 aa	Known RBP	4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	CFAP100	Q494V2	611 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	TUBA1A	Q71U36	451 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	CROCCP2	Q86T23	111 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	CCDC82	Q8N4S0	544 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	NEK9	Q8TD19	979 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	AGAP11	Q8TF27	550 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	IFT74	Q96LB3	600 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	RNPC3	Q96LT9	517 aa	Known RBP	4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	EYA3	Q99504	573 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	CARD14	Q9BXL6	1004 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	NYX	Q9GZU5	481 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	EPC1	Q9H2F5	836 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	METTL5	Q9NRN9	209 aa	Known RBP	4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	BMP2K	Q9NSY1	1161 aa	Predicted RBP	4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	SLC12A6	Q9UHW9	1150 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	FADS3	Q9Y5Q0	445 aa		4.21	□□□□□ -1.74
FAM49B-225	ENST00000523288	SMIM31	A0A1B0GVY4	71 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	GRID2IP	A4D2P6	1211 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288		H0YIN7	160 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SKAP2	O75563	359 aa	Predicted RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	ABL1	P00519	1130 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	MYB	P10242	640 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	RFX1	P22670	979 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	TMOD1	P28289	359 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	STAT6	P42226	847 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	OCRL	Q01968	901 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	PTK7	Q13308	1070 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	ACVR2B	Q13705	512 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CAMK4	Q16566	473 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	GNPTAB	Q3T906	1256 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	C16orf87	Q6PH81	154 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SYCP3	Q8IZU3	236 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	PIP4K2C	Q8TBX8	421 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SREK1	Q8WXA9	508 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SDCCAG3	Q96C92	435 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	USP28	Q96RU2	1077 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CDCA7	Q9BWT1	371 aa	Predicted RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SPATA16	Q9BXB7	569 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	BOLA2	Q9H3K6	86 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	MRPL44	Q9H9J2	332 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CCDC87	Q9NVE4	849 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CCPG1	Q9ULG6	757 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	LEMD3	Q9Y2U8	911 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	MUC3A	Q02505	3323 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SIGLEC16	A6NMB1	481 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	ANKRD65	E5RJM6	399 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	ALDH1L1	O75891	902 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	S100A5	P33763	92 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SCNN1B	P51168	640 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	ATP11A	P98196	1134 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CREB5	Q02930	508 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CAMK2B	Q13554	666 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	SEPT7	Q16181	437 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	RNF187	Q5TA31	235 aa	Predicted RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	LARP1B	Q659C4	914 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	ANKRD13D	Q6ZTN6	518 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZNF804A	Q7Z570	1209 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	FBXO41	Q8TF61	875 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	UNK	Q9C0B0	810 aa	Known RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	CARD9	Q9H257	536 aa		4.2	□□□□□ -1.74
FAM49B-225	ENST00000523288	VAT1L	Q9HCJ6	419 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms