RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SMCR8Q8TEV9 937 aaPredicted RBP8.37□□□□□ -1.07
SDCBP-210ENST00000522843 EZH1Q92800 747 aaPredicted RBP8.37□□□□□ -1.07
SDCBP-210ENST00000522843 YIPF2Q9BWQ6 316 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 KRTAP4-9Q9BYQ8 210 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 TMOD2Q9NZR1 351 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 PRKAG2Q9UGJ0 569 aa8.37□□□□□ -1.07
SDCBP-210ENST00000522843 FRMPD3Q5JV73 1810 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 A6NHS1 94 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 CYP2B6P20813 491 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 CCND3P30281 292 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-210ENST00000522843 EIF1AXP47813 144 aaKnown RBP8.36□□□□□ -1.07
SDCBP-210ENST00000522843 GNAI1P63096 354 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 CACNB2Q08289 660 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-210ENST00000522843 C2CD4AQ8NCU7 369 aaPredicted RBP8.36□□□□□ -1.07
SDCBP-210ENST00000522843 FLCNQ8NFG4 579 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 LINS1Q8NG48 757 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 CHRDQ9H2X0 955 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 CNNM1Q9NRU3 951 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 AGTPBP1Q9UPW5 1226 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 DAGLAQ9Y4D2 1042 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 DOCK2Q92608 1830 aa8.36□□□□□ -1.07
SDCBP-210ENST00000522843 LOC285556D6RIA3 1793 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 PIEZO1Q92508 2521 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 DOCK1Q14185 1865 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 TRIM75PA6NK02 468 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 PDGFAP04085 211 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 SMAD3P84022 425 aaKnown RBP8.35□□□□□ -1.07
SDCBP-210ENST00000522843 SOX4Q06945 474 aaPredicted RBP8.35□□□□□ -1.07
SDCBP-210ENST00000522843 C8orf34Q49A92 452 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 TBC1D22AQ8WUA7 517 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 DNAAF4Q8WXU2 420 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 KAZALD1Q96I82 304 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 ZKSCAN3Q9BRR0 538 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 XIRP2A4UGR9 3374 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 RFX7Q2KHR2 1363 aa8.35□□□□□ -1.07
SDCBP-210ENST00000522843 FAM170BA6NMN3 283 aa8.34□□□□□ -1.07
SDCBP-210ENST00000522843 CCL14Q16627 93 aa8.34□□□□□ -1.07
SDCBP-210ENST00000522843 CCDC57Q2TAC2 916 aa8.34□□□□□ -1.07
SDCBP-210ENST00000522843 VGLL2Q8N8G2 317 aa8.34□□□□□ -1.07
SDCBP-210ENST00000522843 USP6NLQ92738 828 aa8.34□□□□□ -1.07
SDCBP-210ENST00000522843 GATA6Q92908 595 aa8.34□□□□□ -1.07
SDCBP-210ENST00000522843 TSR2Q969E8 191 aaKnown RBP8.34□□□□□ -1.07
SDCBP-210ENST00000522843 MYH16Q9H6N6 1097 aa8.34□□□□□ -1.07
SDCBP-210ENST00000522843 SYNGAP1Q96PV0 1343 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 DDTLA6NHG4 134 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-210ENST00000522843 EIF4EBP3O60516 100 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-210ENST00000522843 ESRRAP11474 423 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-210ENST00000522843 XRCC5P13010 732 aaKnown RBP8.33□□□□□ -1.08
SDCBP-210ENST00000522843 MZF1P28698 734 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-210ENST00000522843 EPHB4P54760 987 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 LRRC24Q50LG9 513 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 TAF7LQ5H9L4 462 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 BEND3Q5T5X7 828 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 LBHD1Q9BQE6 289 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-210ENST00000522843 SENP6Q9GZR1 1112 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-210ENST00000522843 TXNRD2Q9NNW7 524 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 PICK1Q9NRD5 415 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 MORF4L1Q9UBU8 362 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 SUGT1Q9Y2Z0 365 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 RLFQ13129 1914 aa8.33□□□□□ -1.08
SDCBP-210ENST00000522843 MAST3O60307 1309 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 F6X3S4 739 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 APAF1O14727 1248 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 EDN3P14138 238 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 PRDX5P30044 214 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 GCLCP48506 637 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-210ENST00000522843 RGS3P49796 1198 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 RTP1P59025 263 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 RRP1BQ14684 758 aaKnown RBP8.32□□□□□ -1.08
SDCBP-210ENST00000522843 ASAP3Q8TDY4 903 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 BADQ92934 168 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 ARID3AQ99856 593 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 STK31Q9BXU1 1019 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 ASCC2Q9H1I8 757 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-210ENST00000522843 ANO2Q9NQ90 1003 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 DDX4Q9NQI0 724 aaKnown RBP8.32□□□□□ -1.08
SDCBP-210ENST00000522843 USP40Q9NVE5 1235 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 ZC3H7BQ9UGR2 993 aaKnown RBP8.32□□□□□ -1.08
SDCBP-210ENST00000522843 POLIQ9UNA4 740 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 CHD9Q3L8U1 2897 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 REV3LO60673 3130 aa8.32□□□□□ -1.08
SDCBP-210ENST00000522843 TRIM43BA6NCK2 446 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 CTNND1O60716 968 aaKnown RBP8.31□□□□□ -1.08
SDCBP-210ENST00000522843 FRAT2O75474 233 aaPredicted RBP8.31□□□□□ -1.08
SDCBP-210ENST00000522843 NPR3P17342 541 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 FGFR2P21802 821 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 ITGB8P26012 769 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 CYP27A1Q02318 531 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 GSTM4Q03013 218 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 MAP7Q14244 749 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 VPS37DQ86XT2 251 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 TRIM43Q96BQ3 446 aaPredicted RBP8.31□□□□□ -1.08
SDCBP-210ENST00000522843 SUCLG2Q96I99 432 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
SDCBP-210ENST00000522843 ASB2Q96Q27 587 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 IDI2Q9BXS1 227 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 BHLHE41Q9C0J9 482 aaPredicted RBP8.31□□□□□ -1.08
SDCBP-210ENST00000522843 LRRC4CQ9HCJ2 640 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 FLRT1Q9NZU1 646 aa8.31□□□□□ -1.08
SDCBP-210ENST00000522843 MROH5Q6ZUA9 1318 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms