RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 RCOR1Q9UKL0 485 aa27.31■■□□□ 1.96
PVT1-212ENST00000521951 PSMD10O75832 226 aa27.3■■□□□ 1.96
PVT1-212ENST00000521951 AKR1A1P14550 325 aa27.3■■□□□ 1.96
PVT1-212ENST00000521951 PRPHP41219 470 aa27.3■■□□□ 1.96
PVT1-212ENST00000521951 NEDD9Q14511 834 aa27.3■■□□□ 1.96
PVT1-212ENST00000521951 GJC2Q5T442 439 aaPredicted RBP27.3■■□□□ 1.96
PVT1-212ENST00000521951 LRCH2Q5VUJ6 765 aa27.3■■□□□ 1.96
PVT1-212ENST00000521951 NFASCO94856 1347 aa27.3■■□□□ 1.96
PVT1-212ENST00000521951 SEPT4O43236 478 aa27.29■■□□□ 1.96
PVT1-212ENST00000521951 GAS7O60861 476 aa27.29■■□□□ 1.96
PVT1-212ENST00000521951 GGPS1O95749 300 aa27.29■■□□□ 1.96
PVT1-212ENST00000521951 PTGS1P23219 599 aa27.29■■□□□ 1.96
PVT1-212ENST00000521951 MARCKSP29966 332 aaPredicted RBP27.29■■□□□ 1.96
PVT1-212ENST00000521951 ARL6IP4Q66PJ3 421 aaKnown RBP27.29■■□□□ 1.96
PVT1-212ENST00000521951 CYFIP1Q7L576 1253 aa27.29■■□□□ 1.96
PVT1-212ENST00000521951 GIMAP8Q8ND71 665 aaPredicted RBP27.29■■□□□ 1.96
PVT1-212ENST00000521951 SDF4Q9BRK5 362 aa27.29■■□□□ 1.96
PVT1-212ENST00000521951 MORC2Q9Y6X9 1032 aaPredicted RBP27.29■■□□□ 1.96
PVT1-212ENST00000521951 NKRFO15226 690 aaKnown RBP eCLIP27.28■■□□□ 1.968e-7■■□□□ 12.5
PVT1-212ENST00000521951 SPTLC2O15270 562 aa27.28■■□□□ 1.96
PVT1-212ENST00000521951 SORBS3O60504 671 aa27.28■■□□□ 1.96
PVT1-212ENST00000521951 IL17AQ16552 155 aa27.28■■□□□ 1.96
PVT1-212ENST00000521951 CELF3Q5SZQ8 465 aaKnown RBP27.28■■□□□ 1.96
PVT1-212ENST00000521951 LEO1Q8WVC0 666 aaPredicted RBP27.28■■□□□ 1.96
PVT1-212ENST00000521951 TEKT3Q9BXF9 490 aa27.28■■□□□ 1.96
PVT1-212ENST00000521951 SCAND2PQ9GZW5 306 aaPredicted RBP27.28■■□□□ 1.96
PVT1-212ENST00000521951 TTC12Q9H892 705 aaPredicted RBP27.28■■□□□ 1.96
PVT1-212ENST00000521951 HMX1Q9NP08 348 aaPredicted RBP27.28■■□□□ 1.96
PVT1-212ENST00000521951 PCDHA12Q9UN75 941 aa27.28■■□□□ 1.96
PVT1-212ENST00000521951 GNEQ9Y223 722 aaKnown RBP27.28■■□□□ 1.96
PVT1-212ENST00000521951 DDX39AO00148 427 aaKnown RBP27.27■■□□□ 1.96
PVT1-212ENST00000521951 DHX37Q8IY37 1157 aaKnown RBP27.27■■□□□ 1.96
PVT1-212ENST00000521951 SPATA32Q96LK8 384 aa27.27■■□□□ 1.96
PVT1-212ENST00000521951 GH1P01241 217 aa27.26■■□□□ 1.96
PVT1-212ENST00000521951 ARHGAP1Q07960 439 aa27.26■■□□□ 1.96
PVT1-212ENST00000521951 DTHD1Q6ZMT9 781 aa27.26■■□□□ 1.96
PVT1-212ENST00000521951 LENG1Q96BZ8 264 aaPredicted RBP27.26■■□□□ 1.96
PVT1-212ENST00000521951 MLXIPQ9HAP2 919 aa27.26■■□□□ 1.96
PVT1-212ENST00000521951 GDPD2Q9HCC8 539 aa27.26■■□□□ 1.96
PVT1-212ENST00000521951 VAV3Q9UKW4 847 aa27.26■■□□□ 1.96
PVT1-212ENST00000521951 PPP6R2O75170 966 aa27.26■■□□□ 1.95
PVT1-212ENST00000521951 FARP2O94887 1054 aaPredicted RBP27.26■■□□□ 1.95
PVT1-212ENST00000521951 TECP42680 631 aa27.26■■□□□ 1.95
PVT1-212ENST00000521951 METTL7BQ6UX53 244 aa27.26■■□□□ 1.95
PVT1-212ENST00000521951 KCNG4Q8TDN1 519 aa27.26■■□□□ 1.95
PVT1-212ENST00000521951 JPH1Q9HDC5 661 aaPredicted RBP27.26■■□□□ 1.95
PVT1-212ENST00000521951 SLC9A2Q9UBY0 812 aa27.26■■□□□ 1.95
PVT1-212ENST00000521951 FBXO2Q9UK22 296 aaPredicted RBP27.26■■□□□ 1.95
PVT1-212ENST00000521951 POTEFA5A3E0 1075 aa27.25■■□□□ 1.95
PVT1-212ENST00000521951 B3GNT9Q6UX72 402 aa27.25■■□□□ 1.95
PVT1-212ENST00000521951 CLEC17AQ6ZS10 378 aa27.25■■□□□ 1.95
PVT1-212ENST00000521951 FERMT2Q96AC1 680 aa27.25■■□□□ 1.95
PVT1-212ENST00000521951 UNC93B1Q9H1C4 597 aa27.25■■□□□ 1.95
PVT1-212ENST00000521951 UNC45AQ9H3U1 944 aa27.25■■□□□ 1.95
PVT1-212ENST00000521951 Q9Y3F1 56 aa27.25■■□□□ 1.95
PVT1-212ENST00000521951 TELO2Q9Y4R8 837 aa27.25■■□□□ 1.95
PVT1-212ENST00000521951 SRPRBQ9Y5M8 271 aaKnown RBP27.25■■□□□ 1.95
PVT1-212ENST00000521951 VWA3AA6NCI4 1184 aa27.24■■□□□ 1.95
PVT1-212ENST00000521951 DYNC1LI2O43237 492 aaPredicted RBP27.24■■□□□ 1.95
PVT1-212ENST00000521951 DUSP11O75319 330 aaKnown RBP27.24■■□□□ 1.95
PVT1-212ENST00000521951 FXR2P51116 673 aaKnown RBP eCLIP27.24■■□□□ 1.95
PVT1-212ENST00000521951 SPIRE1Q08AE8 756 aa27.24■■□□□ 1.95
PVT1-212ENST00000521951 PPP2R5CQ13362 524 aa27.24■■□□□ 1.95
PVT1-212ENST00000521951 LAMC2Q13753 1193 aa27.24■■□□□ 1.95
PVT1-212ENST00000521951 MTFR1Q15390 333 aa27.24■■□□□ 1.95
PVT1-212ENST00000521951 TMEM266Q2M3C6 531 aa27.24■■□□□ 1.95
PVT1-212ENST00000521951 OR6J1Q8NGC5 347 aa27.24■■□□□ 1.95
PVT1-212ENST00000521951 EMID1Q96A84 441 aaPredicted RBP27.24■■□□□ 1.95
PVT1-212ENST00000521951 DDX20Q9UHI6 824 aaKnown RBP27.24■■□□□ 1.95
PVT1-212ENST00000521951 CCNE2O96020 404 aa27.23■■□□□ 1.95
PVT1-212ENST00000521951 KRT76Q01546 638 aa27.23■■□□□ 1.95
PVT1-212ENST00000521951 SP4Q02446 784 aa27.23■■□□□ 1.95
PVT1-212ENST00000521951 GRIN1Q05586 938 aa27.23■■□□□ 1.95
PVT1-212ENST00000521951 KRI1Q8N9T8 703 aaKnown RBP27.23■■□□□ 1.95
PVT1-212ENST00000521951 ARMC5Q96C12 935 aa27.23■■□□□ 1.95
PVT1-212ENST00000521951 MCOLN1Q9GZU1 580 aa27.23■■□□□ 1.95
PVT1-212ENST00000521951 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.23■■□□□ 1.954e-6■■■□□ 17.4
PVT1-212ENST00000521951 MYCP01106 439 aaPredicted RBP27.22■■□□□ 1.95
PVT1-212ENST00000521951 RARBP10826 455 aa27.22■■□□□ 1.95
PVT1-212ENST00000521951 PDIA5Q14554 519 aa27.22■■□□□ 1.95
PVT1-212ENST00000521951 ZNF746Q6NUN9 644 aaPredicted RBP27.22■■□□□ 1.95
PVT1-212ENST00000521951 TLK2Q86UE8 772 aa27.22■■□□□ 1.95
PVT1-212ENST00000521951 SPATA33Q96N06 139 aa27.22■■□□□ 1.95
PVT1-212ENST00000521951 CLIC6Q96NY7 704 aa27.22■■□□□ 1.95
PVT1-212ENST00000521951 TCEAL9Q9UHQ7 104 aa27.22■■□□□ 1.95
PVT1-212ENST00000521951 POTEMA6NI47 508 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 EML1O00423 815 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 CHMP2AO43633 222 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 CCL5P13501 91 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 ME1P48163 572 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 HSDL1Q3SXM5 330 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 IGSF22Q8N9C0 903 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 ZNF333Q96JL9 665 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 AP5M1Q9H0R1 490 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 PCDHA7Q9UN72 937 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 CENPFP49454 3210 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 ACTR2P61160 394 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 NCAPH2Q6IBW4 605 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 AFG1LQ8WV93 481 aa27.21■■□□□ 1.95
PVT1-212ENST00000521951 ELP1O95163 1332 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms